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Fig. 1 | Microbiome

Fig. 1

From: Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data

Fig. 1

Simulation results for the matched-pair data of scenario (1). “Free” means unrestricted permutation; “no ID” means not adjusting for the set ID. Because the LDM and permanovaFL gave identical results with and without adjustment for set ID indicators, only results using the proposed strategy for these two methods are shown here. adonis2 with unrestricted permutation had inflated type I error in all scenarios we examined and is therefore not shown in subsequent figures that display power or sensitivity

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