Skip to main content

Table 1 For each genome is listed its size (megabasepairs), GC-content and the number of RMS fragments in the 30–500 length interval. Genomes with an asterisk (*) after its name were spiked-in, and not part of the original mock

From: Reduced metagenome sequencing for strain-resolution taxonomic profiles

Genome

Size

GC

RMS-fragments

Acinetobacter baumannii strain 5377

3.98

0.39

961

Schaalia odontolytica strain 1A.21

2.39

0.65

92

Bacillus cereus strain NRS 248

5.22

0.36

2025

Bacteroides vulgatus strain ATCC 8482

5.16

0.42

2047

Clostridium beijerinckii strain NCIMB 8052

6.00

0.30

2463

Cutibacterium acnes strain KPA171202

2.56

0.60

300

Deinococcus radiodurans strain R1

3.06

0.67

115

Enterococcus faecalis ATCC 19433*

2.87

0.38

902

Enterococcus faecalis ATCC 29212*

3.01

0.37

922

Enterococcus faecalis strain OG1RF

2.74

0.38

822

Escherichia coli strain K12 substrain MG1655

4.64

0.51

920

Helicobacter pylori NCTC 11637*

1.60

0.39

233

Helicobacter pylori strain 26695

1.67

0.39

255

Lactobacillus gasseri ATCC 33323*

1.82

0.35

662

Lactobacillus gasseri strain 63 AM

1.89

0.35

675

Listeria monocytogenes strain EGDe

2.94

0.38

1504

Neisseria meningitidis strain MC58

2.27

0.52

332

Pseudomonas aeruginosa strain PAO1-LAC

6.26

0.66

143

Rhodobacter sphaeroides strain ATH 2 4 1

4.13

0.69

92

Staphylococcus aureus strain TCH1516

2.88

0.33

861

Staphylococcus epidermidis FDA strain PCI 1200

2.50

0.32

854

Streptococcus agalactiae ATCC 13813*

2.11

0.35

661

Streptococcus agalactiae strain 2603 V R

2.16

0.36

692

Streptococcus mutans ATCC 25175*

1.99

0.37

671

Streptococcus mutans strain UA159

2.03

0.37

680

Streptococcus pneumoniae ATCC 6305*

2.02

0.40

709

Streptococcus pneumoniae strain TIGR4

2.16

0.40

771