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Fig. 1 | Microbiome

Fig. 1

From: Machine learning-aided analyses of thousands of draft genomes reveal specific features of activated sludge processes

Fig. 1

Overview of the 2045 MAGs assembled from 114 AS microbiomes. a Estimated completeness and contamination of the 2045 MAGs. The position of each horizontal red line refers to the mean contamination value of the corresponding group. b A maximum likelihood phylogenetic tree of the AS archaeal and bacterial MAGs based on universal core gene markers. The genome phylogenetic tree was generated using the universal PhyloPhlAn markers conserved across the bacterial and archaeal domains. A total of 98 MAGs with fewer than 80 universal markers were not included in this tree. The taxonomy of the MAGs was determined using GTDB-Tk, and it is shown in different colors. c Percentages of metagenomic sequencing reads of the different AS samples mapped to the 2045 MAGs

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