Skip to main content

Table 1 Comparison of high and medium quality MAGs from whole community shotgun metagenome to the mini-metagenomes from the Bacteroidetes (CF319a) and Vis6 (subset of Bacteroidetes) enrichments by HCR-FISH&FACS

From: A pipeline for targeted metagenomics of environmental bacteria

 Whole communityBacteroidetes
(CF319a sorts)
(Vis6-814&871 sorts)
Sequenced reads (per replicate)115 M15 M12 M
Number of MAGs (total)1517
Number of Vis6-MAGs included107
16S rRNA in Vis6 MAGNoNoYes