TY - JOUR AU - Holling, C. S. PY - 1973 DA - 1973// TI - Resilience and stability of ecological systems JO - Annu Rev Ecol Syst VL - 4 UR - https://doi.org/10.1146/annurev.es.04.110173.000245 DO - 10.1146/annurev.es.04.110173.000245 ID - Holling1973 ER - TY - JOUR AU - Pimm, S. L. PY - 1984 DA - 1984// TI - The complexity and stability of ecosystems JO - Nature VL - 307 UR - https://doi.org/10.1038/307321a0 DO - 10.1038/307321a0 ID - Pimm1984 ER - TY - JOUR AU - Grimm, V. AU - Wissel, C. PY - 1997 DA - 1997// TI - Babel, or the ecological stability discussions: an inventory and analysis of terminology and a guide for avoiding confusion JO - Oecologia VL - 109 UR - https://doi.org/10.1007/s004420050090 DO - 10.1007/s004420050090 ID - Grimm1997 ER - TY - JOUR AU - Hodgson, D. AU - McDonald, J. L. AU - Hosken, D. J. PY - 2015 DA - 2015// TI - What do you mean, ‘resilient’? JO - Trends Ecol Evol VL - 30 UR - https://doi.org/10.1016/j.tree.2015.06.010 DO - 10.1016/j.tree.2015.06.010 ID - Hodgson2015 ER - TY - STD TI - Ziegler M, Seneca FO, Yum LK, et al. Bacterial community dynamics are linked to patterns of coral heat tolerance. Nat Commun. 2017;8:14213. https://doi.org/10.1038/ncomms14213. ID - ref5 ER - TY - STD TI - Shade A, Peter H, Allison SD, et al. Fundamentals of microbial community resistance and resilience. Front Microbiol. 2012;3. https://doi.org/10.3389/fmicb.2012.00417. ID - ref6 ER - TY - JOUR AU - Ingrisch, J. AU - Bahn, M. PY - 2018 DA - 2018// TI - Towards a comparable quantification of resilience JO - Trends Ecol Evol VL - 33 UR - https://doi.org/10.1016/j.tree.2018.01.013 DO - 10.1016/j.tree.2018.01.013 ID - Ingrisch2018 ER - TY - JOUR AU - Cabrol, L. AU - Poly, F. AU - Malhautier, L. PY - 2016 DA - 2016// TI - Management of microbial communities through transient disturbances enhances the functional resilience of nitrifying gas-biofilters to future disturbances JO - Environ Sci Technol VL - 50 UR - https://doi.org/10.1021/acs.est.5b02740 DO - 10.1021/acs.est.5b02740 ID - Cabrol2016 ER - TY - JOUR AU - Scheffer, M. AU - Carpenter, S. R. AU - Dakos, V. AU - Nes, E. H. PY - 2015 DA - 2015// TI - Generic indicators of ecological resilience: inferring the chance of a critical transition JO - Annu Rev Ecol Evol Syst VL - 46 UR - https://doi.org/10.1146/annurev-ecolsys-112414-054242 DO - 10.1146/annurev-ecolsys-112414-054242 ID - Scheffer2015 ER - TY - JOUR AU - Allison, S. D. AU - Martiny, J. B. H. PY - 2008 DA - 2008// TI - Resistance, resilience, and redundancy in microbial communities JO - Proc Natl Acad Sci VL - 105 UR - https://doi.org/10.1073/pnas.0801925105 DO - 10.1073/pnas.0801925105 ID - Allison2008 ER - TY - JOUR AU - Raymann, K. AU - Shaffer, Z. AU - Moran, N. A. PY - 2017 DA - 2017// TI - Antibiotic exposure perturbs the gut microbiota and elevates mortality in honeybees JO - PLOS Biol VL - 15 UR - https://doi.org/10.1371/journal.pbio.2001861 DO - 10.1371/journal.pbio.2001861 ID - Raymann2017 ER - TY - JOUR AU - Dethlefsen, L. AU - Relman, D. A. PY - 2011 DA - 2011// TI - Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation JO - Proc Natl Acad Sci VL - 108 UR - https://doi.org/10.1073/pnas.1000087107 DO - 10.1073/pnas.1000087107 ID - Dethlefsen2011 ER - TY - JOUR AU - Lozupone, C. A. AU - Stombaugh, J. I. AU - Gordon, J. I. PY - 2012 DA - 2012// TI - Diversity, stability and resilience of the human gut microbiota JO - Nature VL - 489 UR - https://doi.org/10.1038/nature11550 DO - 10.1038/nature11550 ID - Lozupone2012 ER - TY - JOUR AU - Sommer, F. AU - Anderson, J. M. AU - Bharti, R. PY - 2017 DA - 2017// TI - The resilience of the intestinal microbiota influences health and disease JO - Nat Rev Microbiol VL - 15 UR - https://doi.org/10.1038/nrmicro.2017.58 DO - 10.1038/nrmicro.2017.58 ID - Sommer2017 ER - TY - JOUR AU - Hubbell, S. P. PY - 2005 DA - 2005// TI - Neutral theory in community ecology and the hypothesis of functional equivalence JO - Funct Ecol VL - 19 UR - https://doi.org/10.1111/j.0269-8463.2005.00965.x DO - 10.1111/j.0269-8463.2005.00965.x ID - Hubbell2005 ER - TY - JOUR AU - Sloan, W. T. AU - Lunn, M. AU - Woodcock, S. PY - 2006 DA - 2006// TI - Quantifying the roles of immigration and chance in shaping prokaryote community structure JO - Environ Microbiol VL - 8 UR - https://doi.org/10.1111/j.1462-2920.2005.00956.x DO - 10.1111/j.1462-2920.2005.00956.x ID - Sloan2006 ER - TY - JOUR AU - Chase, J. M. PY - 2003 DA - 2003// TI - Community assembly: when should history matter? JO - Oecologia VL - 136 UR - https://doi.org/10.1007/s00442-003-1311-7 DO - 10.1007/s00442-003-1311-7 ID - Chase2003 ER - TY - JOUR AU - Webb, C. O. AU - Ackerly, D. D. AU - McPeek, M. A. AU - Donoghue, M. J. PY - 2002 DA - 2002// TI - Phylogenies and community ecology JO - Annu Rev Ecol Syst VL - 33 UR - https://doi.org/10.1146/annurev.ecolsys.33.010802.150448 DO - 10.1146/annurev.ecolsys.33.010802.150448 ID - Webb2002 ER - TY - JOUR AU - Cadotte, M. W. AU - Davies, T. J. AU - Regetz, J. PY - 2010 DA - 2010// TI - Phylogenetic diversity metrics for ecological communities: integrating species richness, abundance and evolutionary history JO - Ecol Lett VL - 13 UR - https://doi.org/10.1111/j.1461-0248.2009.01405.x DO - 10.1111/j.1461-0248.2009.01405.x ID - Cadotte2010 ER - TY - JOUR AU - Stegen, J. C. AU - Lin, X. AU - Fredrickson, J. K. PY - 2013 DA - 2013// TI - Quantifying community assembly processes and identifying features that impose them JO - ISME J VL - 7 UR - https://doi.org/10.1038/ismej.2013.93 DO - 10.1038/ismej.2013.93 ID - Stegen2013 ER - TY - STD TI - Song H-S, Renslow RS, Fredrickson JK, Lindemann SR. Integrating ecological and engineering concepts of resilience in microbial communities. Front Microbiol. 2015;6. https://doi.org/10.3389/fmicb.2015.01298. ID - ref21 ER - TY - STD TI - Jurburg SD, Nunes I, Stegen JC, et al. Autogenic succession and deterministic recovery following disturbance in soil bacterial communities. Sci Rep. 2017;7. https://doi.org/10.1038/srep45691. ID - ref22 ER - TY - JOUR AU - Placella, S. A. AU - Brodie, E. L. AU - Firestone, M. K. PY - 2012 DA - 2012// TI - Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups JO - Proc Natl Acad Sci VL - 109 UR - https://doi.org/10.1073/pnas.1204306109 DO - 10.1073/pnas.1204306109 ID - Placella2012 ER - TY - JOUR AU - Wendt-Potthoff, K. AU - Koschorreck, M. PY - 2002 DA - 2002// TI - Functional groups and activities of bacteria in a highly acidic volcanic mountain stream and lake in Patagonia, Argentina JO - Microb Ecol VL - 43 UR - https://doi.org/10.1007/s00248-001-1030-8 DO - 10.1007/s00248-001-1030-8 ID - Wendt-Potthoff2002 ER - TY - JOUR AU - Wang, F. AU - Liu, C. AU - Liang, X. AU - Wei, Z. PY - 2003 DA - 2003// TI - Remobilization of trace metals induced by microbiological activities near sediment-water interface, Aha Lake, Guiyang JO - Chin Sci Bull VL - 48 UR - https://doi.org/10.1360/03wd0013 DO - 10.1360/03wd0013 ID - Wang2003 ER - TY - JOUR AU - Gough, H. L. AU - Dahl, A. L. AU - Nolan, M. A. PY - 2008 DA - 2008// TI - Metal impacts on microbial biomass in the anoxic sediments of a contaminated lake JO - J Geophys Res Biogeosciences VL - 113 UR - https://doi.org/10.1029/2007JG000566 DO - 10.1029/2007JG000566 ID - Gough2008 ER - TY - JOUR AU - Hudson-Edwards, K. A. AU - Jamieson, H. E. AU - Lottermoser, B. G. PY - 2011 DA - 2011// TI - Mine wastes: past, present, future JO - Elements VL - 7 UR - https://doi.org/10.2113/gselements.7.6.375 DO - 10.2113/gselements.7.6.375 ID - Hudson-Edwards2011 ER - TY - JOUR AU - Moser, M. AU - Weisse, T. PY - 2011 DA - 2011// TI - The most acidified Austrian lake in comparison to a neutralized mining lake JO - Limnologica VL - 41 UR - https://doi.org/10.1016/j.limno.2011.01.002 DO - 10.1016/j.limno.2011.01.002 ID - Moser2011 ER - TY - JOUR AU - Urbieta, M. S. AU - Toril, E. G. AU - Aguilera, A. PY - 2012 DA - 2012// TI - First prokaryotic biodiversity assessment using molecular techniques of an acidic river in Neuquén, Argentina JO - Microb Ecol VL - 64 UR - https://doi.org/10.1007/s00248-011-9997-2 DO - 10.1007/s00248-011-9997-2 ID - Urbieta2012 ER - TY - JOUR AU - Douglas, T. A. AU - Loseto, L. L. AU - Macdonald, R. W. PY - 2012 DA - 2012// TI - The fate of mercury in Arctic terrestrial and aquatic ecosystems, a review JO - Environ Chem VL - 9 UR - https://doi.org/10.1071/EN11140 DO - 10.1071/EN11140 ID - Douglas2012 ER - TY - JOUR AU - Masmoudi, S. AU - Nguyen-Deroche, N. AU - Caruso, A. PY - 2013 DA - 2013// TI - Cadmium, Copper, Sodium and Zinc Effects on Diatoms: from Heaven to Hell — a Review JO - Cryptogam Algol VL - 34 UR - https://doi.org/10.7872/crya.v34.iss2.2013.185 DO - 10.7872/crya.v34.iss2.2013.185 ID - Masmoudi2013 ER - TY - JOUR AU - Stankovic, S. AU - Moric, I. AU - Pavic, A. PY - 2014 DA - 2014// TI - Investigation of the microbial diversity of an extremely acidic, metal-rich water body (Lake Robule, Bor, Serbia) JO - J Serbian Chem Soc VL - 79 UR - https://doi.org/10.2298/JSC130605071S DO - 10.2298/JSC130605071S ID - Stankovic2014 ER - TY - JOUR AU - Valente, T. AU - Rivera, M. J. AU - Almeida, S. F. P. PY - 2015 DA - 2015// TI - Characterization of water reservoirs affected by acid mine drainage: geochemical, mineralogical, and biological (diatoms) properties of the water JO - Environ Sci Pollut Res VL - 23 UR - https://doi.org/10.1007/s11356-015-4776-0 DO - 10.1007/s11356-015-4776-0 ID - Valente2015 ER - TY - STD TI - Cheaib B, Le Boulch M, Mercier P-L, Derome N. Taxon-function decoupling as an adaptive signature of lake microbial metacommunities under a chronic polymetallic pollution gradient. Front Microbiol. 2018;9. https://doi.org/10.3389/fmicb.2018.00869. ID - ref34 ER - TY - JOUR AU - Pyle, G. G. AU - Rajotte, J. W. AU - Couture, P. PY - 2005 DA - 2005// TI - Effects of industrial metals on wild fish populations along a metal contamination gradient JO - Ecotoxicol Environ Saf VL - 61 UR - https://doi.org/10.1016/j.ecoenv.2004.09.003 DO - 10.1016/j.ecoenv.2004.09.003 ID - Pyle2005 ER - TY - BOOK AU - Couture, P. AU - Rajotte, J. W. AU - Pyle, G. PY - 2008 DA - 2008// TI - Seasonal and regional variations in metal contamination and condition indicators in yellow perch (Perca flavescens) along two polymetallic gradients. III. Energetic and physiological indicators UR - https://doi.org/10.1080/10807030701790314 DO - 10.1080/10807030701790314 ID - Couture2008 ER - TY - JOUR AU - Bougas, B. AU - Normandeau, E. AU - Pierron, F. PY - 2013 DA - 2013// TI - How does exposure to nickel and cadmium affect the transcriptome of yellow perch (Perca flavescens) – Results from a 1000 candidate-gene microarray JO - Aquat Toxicol VL - 142–143 UR - https://doi.org/10.1016/j.aquatox.2013.09.009 DO - 10.1016/j.aquatox.2013.09.009 ID - Bougas2013 ER - TY - JOUR AU - Giguère, A. AU - Campbell, P. G. AU - Hare, L. PY - 2004 DA - 2004// TI - Influence of lake chemistry and fish age on cadmium, copper, and zinc concentrations in various organs of indigenous yellow perch (Perca flavescens) JO - Can J Fish Aquat Sci VL - 61 UR - https://doi.org/10.1139/f04-100 DO - 10.1139/f04-100 ID - Giguère2004 ER - TY - JOUR AU - Campbell, P. G. C. AU - Giguère, A. AU - Bonneris, E. AU - Hare, L. PY - 2005 DA - 2005// TI - Cadmium-handling strategies in two chronically exposed indigenous freshwater organisms—the yellow perch (Perca flavescens) and the floater mollusc (Pyganodon grandis) JO - Aquat Toxicol VL - 72 UR - https://doi.org/10.1016/j.aquatox.2004.11.023 DO - 10.1016/j.aquatox.2004.11.023 ID - Campbell2005 ER - TY - JOUR AU - Sylvain, F. -. É. AU - Derome, N. PY - 2017 DA - 2017// TI - Vertically and horizontally transmitted microbial symbionts shape the gut microbiota ontogenesis of a skin-mucus feeding discus fish progeny JO - Sci Rep VL - 7 UR - https://doi.org/10.1038/s41598-017-05662-w DO - 10.1038/s41598-017-05662-w ID - Sylvain2017 ER - TY - JOUR AU - Burns, A. R. AU - Stephens, W. Z. AU - Stagaman, K. PY - 2016 DA - 2016// TI - Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development JO - ISME J VL - 10 UR - https://doi.org/10.1038/ismej.2015.142 DO - 10.1038/ismej.2015.142 ID - Burns2016 ER - TY - JOUR AU - Sylvain, F. -. É. AU - Cheaib, B. AU - Llewellyn, M. PY - 2016 DA - 2016// TI - pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum) JO - Sci Rep VL - 6 UR - https://doi.org/10.1038/srep32032 DO - 10.1038/srep32032 ID - Sylvain2016 ER - TY - JOUR AU - Llewellyn, M. S. AU - McGinnity, P. AU - Dionne, M. PY - 2016 DA - 2016// TI - The biogeography of the atlantic salmon (Salmo salar) gut microbiome JO - ISME J VL - 10 UR - https://doi.org/10.1038/ismej.2015.189 DO - 10.1038/ismej.2015.189 ID - Llewellyn2016 ER - TY - JOUR AU - Masella, A. P. AU - Bartram, A. K. AU - Truszkowski, J. M. PY - 2012 DA - 2012// TI - PANDAseq: paired-end assembler for illumina sequences JO - BMC Bioinformatics VL - 13 UR - https://doi.org/10.1186/1471-2105-13-31 DO - 10.1186/1471-2105-13-31 ID - Masella2012 ER - TY - STD TI - Edgar RC. UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing. bioRxiv. 2016:081257. https://doi.org/10.1101/081257. ID - ref45 ER - TY - JOUR AU - Chen, J. AU - Bittinger, K. AU - Charlson, E. S. PY - 2012 DA - 2012// TI - Associating microbiome composition with environmental covariates using generalized UniFrac distances JO - Bioinforma Oxf Engl VL - 28 UR - https://doi.org/10.1093/bioinformatics/bts342 DO - 10.1093/bioinformatics/bts342 ID - Chen2012 ER - TY - STD TI - Oksanen J, Blanchet FG, Friendly M, et al. Community ecology package. R Packag. 2016:2.3–3. https://doi.org/10.4135/9781412971874.n145. ID - ref47 ER - TY - JOUR AU - Lagkouvardos, I. AU - Fischer, S. AU - Kumar, N. AU - Clavel, T. PY - 2017 DA - 2017// TI - Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons JO - PeerJ VL - 5 UR - https://doi.org/10.7717/peerj.2836 DO - 10.7717/peerj.2836 ID - Lagkouvardos2017 ER - TY - JOUR AU - Chen, W. AU - Zhang, C. K. AU - Cheng, Y. PY - 2013 DA - 2013// TI - A comparison of methods for clustering 16S rRNA sequences into OTUs JO - PLoS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0070837 DO - 10.1371/journal.pone.0070837 ID - Chen2013 ER - TY - JOUR AU - Weiss, S. AU - Treuren, W. AU - Lozupone, C. PY - 2016 DA - 2016// TI - Correlation detection strategies in microbial data sets vary widely in sensitivity and precision JO - ISME J VL - 10 UR - https://doi.org/10.1038/ismej.2015.235 DO - 10.1038/ismej.2015.235 ID - Weiss2016 ER - TY - JOUR AU - Shannon, P. AU - Markiel, A. AU - Ozier, O. PY - 2003 DA - 2003// TI - Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks JO - Genome Res VL - 13 UR - https://doi.org/10.1101/gr.1239303 DO - 10.1101/gr.1239303 ID - Shannon2003 ER - TY - JOUR AU - Röttjers, L. AU - Faust, K. PY - 2018 DA - 2018// TI - From hairballs to hypotheses-biological insights from microbial networks JO - FEMS Microbiol Rev VL - 42 UR - https://doi.org/10.1093/femsre/fuy030 DO - 10.1093/femsre/fuy030 ID - Röttjers2018 ER - TY - JOUR AU - Aßhauer, K. P. AU - Wemheuer, B. AU - Daniel, R. AU - Meinicke, P. PY - 2015 DA - 2015// TI - Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data JO - Bioinformatics VL - 31 UR - https://doi.org/10.1093/bioinformatics/btv287 DO - 10.1093/bioinformatics/btv287 ID - Aßhauer2015 ER - TY - JOUR AU - Silver, S. AU - Phung, L. T. PY - 1996 DA - 1996// TI - BACTERIAL HEAVY METAL RESISTANCE: New Surprises JO - Annu Rev Microbiol VL - 50 UR - https://doi.org/10.1146/annurev.micro.50.1.753 DO - 10.1146/annurev.micro.50.1.753 ID - Silver1996 ER - TY - JOUR AU - Defo, M. A. AU - Spear, P. A. AU - Couture, P. PY - 2014 DA - 2014// TI - Consequences of metal exposure on retinoid metabolism in vertebrates: A review JO - Toxicol Lett VL - 225 UR - https://doi.org/10.1016/j.toxlet.2013.11.024 DO - 10.1016/j.toxlet.2013.11.024 ID - Defo2014 ER - TY - STD TI - Jezierska B, Witeska M. The metal uptake and accumulation in fish living in polluted waters. In: Twardowska I, Allen HE, Häggblom MM, Stefaniak S, editors. Soil and Water Pollution Monitoring, Protection and Remediation. Springer Netherlands; 2006. p. 107–14. ID - ref56 ER - TY - JOUR AU - Giguère, A. AU - Campbell, P. G. C. AU - Hare, L. AU - Couture, P. PY - 2006 DA - 2006// TI - Sub-cellular partitioning of cadmium, copper, nickel and zinc in indigenous yellow perch (Perca flavescens) sampled along a polymetallic gradient JO - Aquat Toxicol VL - 77 UR - https://doi.org/10.1016/j.aquatox.2005.12.001 DO - 10.1016/j.aquatox.2005.12.001 ID - Giguère2006 ER - TY - JOUR AU - Klinck, J. S. AU - Green, W. W. AU - Mirza, R. S. PY - 2007 DA - 2007// TI - Branchial cadmium and copper binding and intestinal cadmium uptake in wild yellow perch (Perca flavescens) from clean and metal-contaminated lakes JO - Aquat Toxicol VL - 84 UR - https://doi.org/10.1016/j.aquatox.2007.03.024 DO - 10.1016/j.aquatox.2007.03.024 ID - Klinck2007 ER - TY - JOUR AU - Xie, L. AU - Lambert, D. AU - Martin, C. PY - 2008 DA - 2008// TI - Cadmium biodynamics in the oligochaete Lumbriculus variegatus and its implications for trophic transfer JO - Aquat Toxicol VL - 86 UR - https://doi.org/10.1016/j.aquatox.2007.11.008 DO - 10.1016/j.aquatox.2007.11.008 ID - Xie2008 ER - TY - JOUR AU - Nirola, R. AU - Megharaj, M. AU - Saint, C. PY - 2016 DA - 2016// TI - Metal bioavailability to Eisenia fetida through copper mine dwelling animal and plant litter, a new challenge on contaminated environment remediation JO - Int Biodeterior Biodegrad VL - 113 UR - https://doi.org/10.1016/j.ibiod.2016.03.007 DO - 10.1016/j.ibiod.2016.03.007 ID - Nirola2016 ER - TY - JOUR AU - Chen, Y. P. AU - Liu, Q. AU - Liu, Y. J. PY - 2014 DA - 2014// TI - Responses of soil microbial activity to cadmium pollution and elevated CO2 JO - Sci Rep VL - 4 UR - https://doi.org/10.1038/srep04287 DO - 10.1038/srep04287 ID - Chen2014 ER - TY - JOUR AU - Liu, Y. AU - Li, Y. AU - Liu, K. AU - Shen, J. PY - 2014 DA - 2014// TI - Exposing to cadmium stress cause profound toxic effect on microbiota of the mice intestinal tract JO - PLOS ONE VL - 9 UR - https://doi.org/10.1371/journal.pone.0085323 DO - 10.1371/journal.pone.0085323 ID - Liu2014 ER - TY - JOUR AU - Zhang, S. AU - Jin, Y. AU - Zeng, Z. PY - 2015 DA - 2015// TI - Subchronic exposure of mice to cadmium perturbs their hepatic energy metabolism and gut microbiome JO - Chem Res Toxicol VL - 28 UR - https://doi.org/10.1021/acs.chemrestox.5b00237 DO - 10.1021/acs.chemrestox.5b00237 ID - Zhang2015 ER - TY - JOUR AU - Qian, B. AU - Mian, L. AU - Peizhan, C. PY - 2017 DA - 2017// TI - Sex-dependent effects of cadmium exposure in early life on gut microbiota and fat accumulation in mice JO - Environ Health Perspect VL - 125 UR - https://doi.org/10.1289/EHP360 DO - 10.1289/EHP360 ID - Qian2017 ER - TY - JOUR AU - Šrut, M. AU - Menke, S. AU - Höckner, M. AU - Sommer, S. PY - 2019 DA - 2019// TI - Earthworms and cadmium – heavy metal resistant gut bacteria as indicators for heavy metal pollution in soils? JO - Ecotoxicol Environ Saf VL - 171 UR - https://doi.org/10.1016/j.ecoenv.2018.12.102 DO - 10.1016/j.ecoenv.2018.12.102 ID - Šrut2019 ER - TY - JOUR AU - Pinter, T. B. J. AU - Stillman, M. J. PY - 2015 DA - 2015// TI - Kinetics of zinc and cadmium exchanges between metallothionein and carbonic anhydrase JO - Biochemistry VL - 54 UR - https://doi.org/10.1021/acs.biochem.5b00912 DO - 10.1021/acs.biochem.5b00912 ID - Pinter2015 ER - TY - STD TI - Singh P, Teal TK, Marsh TL, et al. Intestinal microbial communities associated with acute enteric infections and disease recovery. Microbiome. 2015:3. https://doi.org/10.1186/s40168-015-0109-2. ID - ref67 ER - TY - JOUR AU - Griffiths, B. S. AU - Philippot, L. PY - 2013 DA - 2013// TI - Insights into the resistance and resilience of the soil microbial community JO - FEMS Microbiol Rev VL - 37 UR - https://doi.org/10.1111/j.1574-6976.2012.00343.x DO - 10.1111/j.1574-6976.2012.00343.x ID - Griffiths2013 ER - TY - JOUR AU - Vrieze, J. AU - Christiaens, M. E. R. AU - Walraedt, D. PY - 2017 DA - 2017// TI - Microbial community redundancy in anaerobic digestion drives process recovery after salinity exposure JO - Water Res VL - 111 UR - https://doi.org/10.1016/j.watres.2016.12.042 DO - 10.1016/j.watres.2016.12.042 ID - Vrieze2017 ER - TY - JOUR AU - Regueiro, L. AU - Carballa, M. AU - Lema, J. M. PY - 2016 DA - 2016// TI - Microbiome response to controlled shifts in ammonium and LCFA levels in co-digestion systems JO - J Biotechnol VL - 220 UR - https://doi.org/10.1016/j.jbiotec.2016.01.006 DO - 10.1016/j.jbiotec.2016.01.006 ID - Regueiro2016 ER - TY - JOUR AU - Navarrete, P. AU - Mardones, P. AU - Opazo, R. PY - 2008 DA - 2008// TI - Oxytetracycline treatment reduces bacterial diversity of intestinal microbiota of atlantic salmon JO - J Aquat Anim Health VL - 20 UR - https://doi.org/10.1577/H07-043.1 DO - 10.1577/H07-043.1 ID - Navarrete2008 ER - TY - JOUR AU - Narrowe, A. B. AU - Albuthi-Lantz, M. AU - Smith, E. P. PY - 2015 DA - 2015// TI - Perturbation and restoration of the fathead minnow gut microbiome after low-level triclosan exposure JO - Microbiome VL - 3 UR - https://doi.org/10.1186/s40168-015-0069-6 DO - 10.1186/s40168-015-0069-6 ID - Narrowe2015 ER - TY - JOUR AU - Regueiro, L. AU - Carballa, M. AU - Lema, J. M. PY - 2014 DA - 2014// TI - Outlining microbial community dynamics during temperature drop and subsequent recovery period in anaerobic co-digestion systems JO - J Biotechnol VL - 192 UR - https://doi.org/10.1016/j.jbiotec.2014.10.007 DO - 10.1016/j.jbiotec.2014.10.007 ID - Regueiro2014 ER - TY - JOUR AU - Zha, Y. AU - Eiler, A. AU - Johansson, F. AU - Svanbäck, R. PY - 2018 DA - 2018// TI - Effects of predation stress and food ration on perch gut microbiota JO - Microbiome VL - 6 UR - https://doi.org/10.1186/s40168-018-0400-0 DO - 10.1186/s40168-018-0400-0 ID - Zha2018 ER - TY - JOUR AU - Bolnick, D. I. AU - Snowberg, L. K. AU - Hirsch, P. E. PY - 2014 DA - 2014// TI - Individual diet has sex-dependent effects on vertebrate gut microbiota JO - Nat Commun VL - 5 UR - https://doi.org/10.1038/ncomms5500 DO - 10.1038/ncomms5500 ID - Bolnick2014 ER - TY - JOUR AU - Cho, I. AU - Yamanishi, S. AU - Cox, L. PY - 2012 DA - 2012// TI - Antibiotics in early life alter the murine colonic microbiome and adiposity JO - Nature VL - 488 UR - https://doi.org/10.1038/nature11400 DO - 10.1038/nature11400 ID - Cho2012 ER - TY - JOUR AU - Holben, W. E. AU - Williams, P. AU - Saarinen, M. PY - 2002 DA - 2002// TI - Phylogenetic analysis of intestinal microflora indicates a novel mycoplasma phylotype in farmed and wild salmon JO - Microb Ecol VL - 44 UR - https://doi.org/10.1007/s00248-002-1011-6 DO - 10.1007/s00248-002-1011-6 ID - Holben2002 ER -