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Table 3 The major topological properties of Frantoio and Picual co-occurrence networks

From: Linking belowground microbial network changes to different tolerance level towards Verticillium wilt of olive

CommunityNo. of original OTUsSimilarity threshold (St)Total nodesTotal linksPercentage of positive edges (PEP)R2 of power-lawAvg connectivity (avgK)Avg path distance (GD)Avg clustering coefficient (avgCC)Modularity (M)
Fra EndoDNA_C12990.8127876795.44%0.8655.5184.180*0.253*0.628 (22)*
Fra EndoDNA_Ino12270.86334166994.73%0.8199.9943.117*0.289*0.418 (37)*
Fra EndoRNA_C14640.7741956378.15%0.8472.6877.051*0.143*0.827 (53)*
Fra EndoRNA_Ino14060.8748672366.80%0.8722.9756.323*0.150*0.802 (55)*
Pic EndoDNA_C13320.8028068393.41%0.8684.8794.746*0.258*0.637 (26)*
Pic EndoDNA_Ino11490.8133773283.61%0.9064.3444.986*0.248*0.674 (37)*
Pic EndoRNA_C14600.8038880589.69%0.9444.1494.155*0.189*0.609 (49)*
Pic EndoRNA_Ino13930.9441250369.78%0.9252.4428.516*0.140*0.854 (51)*
Fra RhizoDNA_C18500.8453099990.89%0.9143.7706.838*0.179*0.729 (71)*
Fra RhizoDNA_Ino18290.8274887185.65%0.8812.3298.664*0.097*0.893 (136)*
Fra RhizoRNA_C18710.8561686494.21%0.9192.8057.992*0.174*0.830 (89)*
Fra RhizoRNA_Ino18570.9121217294.19%0.8491.6233.318*0.123*0.911 (70)*
Pic RhizoDNA_C18500.83595139791.41%0.8914.6965.095*0.150*0.608 (86)*
Pic RhizoDNA_Ino18230.83811108687.48%0.9132.67811.448*0.157*0.869 (121)*
Pic RhizoRNA_C18710.84730140198.29%0.8923.8388.042*0.224*0.776 (88)*
Pic RhizoRNA_Ino18600.89689100488.94%0.9132.9147.815*0.180*0.832 (97)*
  1. Significant p values (p < 0.022) between cultivars are shown in boldface. Asterisks indicate significant p values (p < 0.0005) between treatments (control versus inoculated). Pic Picual, Fra Frantoio, Endo root endosphere, Rhizo rhizosphere, C control; Ino inoculated with Verticillium dahliae. The brackets in Modularity values mean the number of modules in that network