Table 4 Physicochemical, functional, and structural prediction of novel sProteins exclusively identified in the SIHUMIx community culture experiments.
From: Discovery of novel community-relevant small proteins in a simplified human intestinal microbiome
Abbr. | Size [aa] | pI | Aliphatic index | Gravy score | AMPs (prediction probability) | Localization (posterior probability) | Structure prediction |
|---|---|---|---|---|---|---|---|
CR2 | 31 | 10.95 | 62.9 | − 1.2968 | AMP (0.992) | Cytoplasmic (0.646) | |
BP3 | 45 | 6.11 | 56.4 | − 1.7111 | Non-AMP (0.002) | Cytoplasmic (0.534) | |
BP5 | 48 | 9.87 | 48.8 | − 1.7083 | Non-AMP (0.001) | Non-cytoplasmic (0.539) | |
BP8 | 57 | 10.01 | 80.4 | − 0.5320 | Non-AMP (0.002) | Non-cytoplasmic (0.663) | |
BP11 | 64 | 6.68 | 68.4 | − 0.6781 | Non-AMP (0.053) | Non-cytoplasmic (0.596) | |
BP12 | 66 | 9.64 | 70.9 | − 0.6409 | AMP (0.986) | Non-cytoplasmic (0.634) | |
