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Fig. 3 | Microbiome

Fig. 3

From: Microdiversity and phylogeographic diversification of bacterioplankton in pelagic freshwater systems revealed through long-read amplicon sequencing

Fig. 3

Schematic illustration of mismatches and gaps found in the 16S rRNA gene and internal transcribed spacer (ITS) sequences of the CL500-11 lineage, including the five dominant amplicon sequence variants (ASVs) and five publicly available sequences (see main text for details). Nucleotide variations among Japanese sequences (shown in pink) are displayed, with four variable base positions in the ITS sequence represented by gray numbers. Other mismatches and gaps are indicated with red arrows, and the same sequence type is indicated by the same color. The heat map indicates the relative abundances of ASVs within the CL500-11 lineage in each sample. Abbreviations for sample names follow those in Fig. 5

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