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Table 1 Summary of the assemblies for subsampled linked-reads from human gut microbiome and Illumina short-reads

From: A comprehensive investigation of metagenome assembly by linked-read sequencing

Configurations

No. of bins

Total length (Mb)

High (%)

Medium (%)

Low (%)

Others (%)

SCall

148

399.41

9 (6.08%)

23 (15.54)

48 (32.43)

68 (45.95)

SCR1

104

290.49

10 (9.62)

30 (28.85)

28 (26.92)

36 (34.62)

SCR2

80

225.73

11 (13.75)

15 (18.75)

25 (31.25)

29 (36.25)

SCR4

49

159.40

15 (30.61)

9 (18.37)

10 (20.41)

15 (30.61)

SCR8

36

115.96

6 (16.67)

16 (44.44)

6 (16.67)

8 (22.22)

SCF1

98

305.24

14 (14.29)

20 (20.41)

23 (23.47)

41(41.84)

SCF2

89

244.55

7 (7.87)

16 (17.98)

30 (33.71)

36 (40.45)

SCF4

64

188.90

7 (10.94)

13 (20.31)

19 (29.69)

25 (39.06)

SCF8

48

152.65

9 (18.75)

10 (20.83)

14 (29.17)

15 (31.25)

ILLU

53

145.50

0 (0)

16 (30.19)

16 (30.19)

21 (39.62)

  1. ILLU assembly from Illumina short-reads