Skip to main content

Table 1 Metagenome-assembled genome properties

From: A genomic view of trophic and metabolic diversity in clade-specific Lamellodysidea sponge microbiomes

Host cladeMAG nameTotal lengthPct GCNum scfGene count16S lenCheckM completeCheckM contamTaxonomy
IaSP12AHP12,316,39754.61252323146791.40.0Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae
IaSP12ARB12,913,12557.22623307138169.10.0Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
IaSP12BCY12,978,90339.920228681517100.00.0Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Ekhidna
IaSP12CHS14,999,04148.05736155148696.60.2Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Gomontiellaceae; Hormoscilla
IaSP5AHP22,126,94054.91532340146787.80.0Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae
IaSP5ARB12,540,90859.81182682141582.43.4Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
IaSP5ARS32,817,71263.5462617n.d94.80.0Alphaproteobacteria: Rhodospirillales
IaSP5BCY12,936,92439.72002813151796.40.5Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Ekhidna
IaSP5CHS14,838,07847.74455922148496.60.2Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Gomontiellaceae; Hormoscilla
IaSP5CPC2,787,14343.83973056144277.40.0Cyanobacteria; Synechococcales; Prochloraceae; Prochloron
IaSP5GCR11,621,86544.7281518154298.30.0Gammaproteobacteria; Chromatiales
IaSP5OBV11,589,24329.8571544146991.20.0Oligoflexia; Bdellovibrionales
IbGM102ARS11,092,14965.2302118026341.20.8Alphaproteobacteria: Rhodospirillales
IbGM102HS15,041,89047.5518659122795.71.8Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Gomontiellaceae; Hormoscilla
IIGM202ARS12,820,03863.51829121500100.00.0Alphaproteobacteria: Rhodospirillales
IIGM202ARS21,828,91253.3491885149685.30.8Alphaproteobacteria: Candidatus Methylospongiales
IIGM202BCY13,008,28440.31222918151794.90.5Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Ekhidna
IIGM202CHS1a6,869,62347.5707441149297.42.0Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Gomontiellaceae; Hormoscilla
IIIGM7ARB12,553,11360.7592499146396.60.0Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
IIIGM7ARB22,578,99359.9372551123593.70.9Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
IIIGM7ARS41,589,24352.02414256691.00.8Alphaproteobacteria: Candidatus Methylospongiales
IIIGM7CHS1b6,299,67947.8661601484100.01.8Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Gomontiellaceae
IIIGM7GCV11,911,34161.0401792152489.10.0Gammaproteobacteria; Cellvibrionales
  1. Additional metadata and genome quality information are provided in Supplementary Table 3; n.d. not detected. Symbols denote genomes previously described in [13]
  2. aMAG GUM202CHS1 is identical to NCBI accession RFFC00000000.1
  3. bMAG GM7CHS1 was newly assembled as described in the “Methods” section, replacing NCBI accession RFFB00000000.1