Fig. 1
From: The microbiome as a biosensor: functional profiles elucidate hidden stress in hosts
Plant host functional response to TWW irrigation revealed by tomato and lettuce transcriptome analysis. Differentially expressed plant genes between FW or TWW irrigation were determined using the software package EdgeR, with significance set at FDR p < 0.05. Lettuce transcripts were annotated by comparison to the tomato genome. STRING protein interaction networks are presented for a FW and b TWW irrigation enriched gene list. Only nodes linked by edges are shown. The size of each node is proportional to the log10 (p value) of the enriched gene. Colored are PFAM protein domains significantly enriched within the network landscape. The log10 (p value) of the enriched PFAM domains are presented in c FW and d TWW enrichment analyses