Phylum | Genus | E-LPC reads | BWA aligned (mapped) sequence reads | Mean read length (bp) | C-T p values | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BRS1 SC1 | BRS2 | BRS3 | BRS4 | BRS5 SC2 | Total | Total % | BRS IM total | BRS IM % | BRS1 SC1 | BRS2 | BRS3 | BRS4 | BRS5 SC2 | ||||
Euryarchaeota | Methanobrevibacter | 19 | 7 | 1952 | 1109 | 29147 | 69 | 32303 | 4.67 | 32208 | 4.68 | 70.60 | − | 0.193028900 | 0.073998830 | 0.002632932 | 0.567650800 |
Actinobacteria | Cellulomonas | 0 | 65 | 3445 | 1626 | 54666 | 143 | 59945 | 8.67 | 59737 | 8.68 | 66.60 | 0.921500700 | 0.002823314 | 0.153993200 | 0.006118848 | 0.509736300 |
Slackia | 0 | 5 | 89 | 29 | 1343 | 8 | 1474 | 0.21 | 1461 | 0.21 | 61.80 | 0.007399490 | 0.935197800 | 0.311623400 | 0.508960500 | − | |
Bacteroidetes | Alistipes | 2 | 4 | 139 | 46 | 1069 | 15 | 1275 | 0.18 | 1254 | 0.18 | 65.40 | 0.675706100 | 0.420822200 | 0.053055550 | 0.031112450 | 0.606658100 |
Bacteroides | 5 | 114 | 28316 | 10115 | 115446 | 162 | 154158 | 22.30 | 153877 | 22.36 | 72.20 | 0.721165000 | 0.001696204 | 0.000000390 | 0.000622655 | 0.142918300 | |
Flavobacterium | 32 | 58 | 6986 | 3125 | 33452 | 72 | 43725 | 6.33 | 43563 | 6.33 | 64.40 | 0.216522900 | 0.000235190 | 0.000039500 | 0.022810540 | 0.921151200 | |
Pedobacter | 1 | 23 | 1656 | 715 | 9663 | 19 | 12077 | 1.75 | 12034 | 1.75 | 62.80 | 0.500000000 | 0.001704170 | 0.075530930 | 0.062391830 | 0.161709000 | |
Prevotella | 17 | 48 | 418 | 184 | 3712 | 43 | 4422 | 0.64 | 4314 | 0.63 | 61.00 | 0.099233850 | 0.305674400 | 0.081571890 | 0.016625350 | 0.631959800 | |
Firmicutes | Blautia | 15 | 72 | 276 | 124 | 3640 | 111 | 4238 | 0.61 | 4040 | 0.59 | 68.20 | 0.608740100 | 0.084446270 | 0.428864300 | 0.045772080 | 0.245663300 |
Butyrivibrio | 0 | 8 | 325 | 127 | 3082 | 6 | 3548 | 0.51 | 3534 | 0.51 | 58.20 | 0.395839900 | 0.037614750 | 0.109365700 | 0.273060200 | 0.580047400 | |
Clostridium | 4 | 148 | 2671 | 1304 | 29948 | 135 | 34210 | 4.95 | 33923 | 4.93 | 65.80 | 0.074740200 | 0.296300200 | 0.190844300 | 0.015163840 | 0.360285900 | |
Enterococcus | 1 | 156 | 553 | 298 | 7427 | 20 | 8455 | 1.22 | 8278 | 1.20 | 74.60 | 0.003765520 | 0.333696100 | 0.022915900 | 0.274913800 | − | |
Eubacterium | 0 | 40 | 697 | 296 | 9029 | 51 | 10113 | 1.46 | 10022 | 1.46 | 65.80 | 0.106194500 | 0.004360991 | 0.056443760 | 0.024325710 | 0.246347100 | |
Lactobacillus | 0 | 143 | 0 | 259 | 6728 | 14 | 7144 | 1.03 | 6987 | 1.02 | 69.00 | 0.157217100 | − | 0.011884140 | 0.903384000 | − | |
Lactococcus | 12 | 118 | 595 | 361 | 6219 | 14 | 7319 | 1.06 | 7175 | 1.04 | 69.60 | 0.463765800 | 0.006836895 | 0.033206520 | 0.000000013 | − | |
Mogibacterium | 0 | 7 | 176 | 76 | 2116 | 5 | 2380 | 0.34 | 2368 | 0.34 | 68.60 | 0.499997800 | 0.228221200 | 0.019403830 | 0.008329356 | 0.188080100 | |
Oribacterium | 1 | 12 | 170 | 72 | 2018 | 2 | 2275 | 0.33 | 2260 | 0.33 | 64.60 | 0.167621400 | 0.050161290 | 0.349725600 | 0.000162173 | − | |
Oscillibacter | 0 | 7 | 165 | 91 | 1787 | 12 | 2062 | 0.30 | 2043 | 0.30 | 63.00 | 0.120518600 | 0.009668940 | 0.349725600 | 0.095004240 | 0.072742730 | |
Ruminococcus | 18 | 42 | 1119 | 464 | 9229 | 100 | 10972 | 1.59 | 10812 | 1.57 | 67.40 | 0.271433200 | 0.048583730 | 0.738132500 | 0.001960024 | 0.300862800 | |
Sarcina | 0 | 3 | 508 | 202 | 327 | 2 | 1042 | 0.15 | 1037 | 0.15 | 67.00 | − | 0.413740500 | 0.018963150 | 0.025439260 | − | |
Proteobacteria | Enterobacter | 0 | 145 | 41220 | 14798 | 181051 | 205 | 237419 | 34.34 | 237069 | 34.45 | 71.80 | 0.004146302 | 0.000377506 | 0.000009640 | 0.001112472 | 0.132896300 |
Klebsiella | 14 | 21 | 3485 | 1217 | 15633 | 72 | 20442 | 2.96 | 20335 | 2.96 | 70.00 | 0.529037900 | 0.001153996 | 0.001264576 | 0.000436448 | 0.921151200 | |
Sphingobium | 0 | 36 | 1023 | 458 | 8330 | 84 | 9931 | 1.44 | 9811 | 1.43 | 65.80 | 0.126796900 | 0.132801100 | 0.045433740 | 0.000753091 | 0.602973600 | |
Variovorax | 0 | 112 | 2099 | 878 | 16970 | 315 | 20374 | 2.95 | 19947 | 2.90 | 69.60 | 0.259295700 | 0.005879342 | 0.057844450 | 0.020613870 | 0.171048100 | |
Total | 141 | 1394 | 98083 | 37974 | 552032 | 1679 | 691303 | 100.00 | 688089 | 100.00 | 66.83 | − | − | − | − | − |