Skip to main content

Table 1 Species used to benchmark MetaEuk

From: MetaEuk—sensitive, high-throughput gene discovery, and annotation for large-scale eukaryotic metagenomics

SpeciesGroupGenome size (Mbp)# scaffolds# annotated proteins% multi-exon proteinsGC%MetaEuk run time against UniRef90
Schizosaccharomyces pombeFungi12.5945132473635 m
Acanthamoeba castellanii str. NeffAmoebozoa42.0238414,9749157.859 m
Phytomonas sp. isolate EM1Excavata17.78138638104837 m
Babesia bigeminaAlveolates13.8448350795450.635 m
Nucleomorph of Lotharella oceanicaRhizaria0.6846683932.824 m
Phaeodactylum tricornutumStramenopiles27.458810,4084648.851 m
Aspergillus nidulansEurotiomycetes30.289195568850.352 m