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Table 1 Positive correlations between antibiotic resistance gene expression and bacterial taxa

From: Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection

Antibiotic resistance genes

aTaxa (positive associations)

P values

Correlation values

Beta-lactams

g_Salinicoccus

0.026

0.08

f_Gemellaceae

0.030

0.05

g_Granulicatella

0.034

0.04

g_Streptococcus

< 0.0005

0.09

g_Methylobacterium

0.024

0.05

g_Moraxella

0.022

0.09

macrolide-lincosamide-streptogramin (MLS)

g_Bifidobacterium

0.038

0.05

g_Kaistobacter

0.009

0.06

g_Sphingomonas

0.022

0.07

f_Gemellaceae

0.024

0.08

g_Bulleidia

0.007

0.06

Tetracyclines

g_Brachybacterium

0.042

0.06

g_Tannerella

0.006

0.06

f_Planococcaceae

0.034

0.05

f_Aerococcaceae

0.046

0.046

g_Selenomonas

0.010

0.08

g_Leptotrichia

0.033

0.08

g_Sphingomonas

0.004

0.10

g_Deinococcus

0.020

0.06

Multidrug resistance

g_Rothia

0.020

0.07

f_Gemellaceae

0.009

0.08

g_Streptococcus

0.045

0.06

g_Leptotrichia

0.019

0.07

g_Neisseria

0.035

0.09

g_Sphingomonas

0.026

0.08

g_Erwinia

0.036

0.09

f_Enterobacteriaceae

0.041

0.10

  1. af_ and g_ indicate whether the taxonomic assignment was made at the family or genus level, respectively