Skip to main content
Fig. 5 | Microbiome

Fig. 5

From: Estimating relative biomasses of organisms in microbiota using “phylopeptidomics”

Fig. 5

Violin plot of the ratios of the biomass percentage relative to the expected percentage for each species, for the method based on the protein quantification reported in Kleiner et al. and for the phylopeptidomics method. The sample used was Run5_P1_2000ng from Kleiner et al. [11], with an equal protein amount per organism. Results for strains from the same species have been cumulated into one species level result for Staphylococcus aureus and Rhizobium leguminosarum, virus results are not reported, and Nitrosomonas europaea, Nitrosomonas ureae, Nitrosomonas multiformis, and Desulfovibrio vulgaris are ignored as per Kleiner et al. [11] Supplementary Data 1, resulting in 19 species results compared as displayed in Supplementary Table SIV. The phylopeptidomics ratio median and distributions are closer to the target of 1, compared with that of Kleiner et al. [11] published results

Back to article page