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Table 2 Bacterial taxa associated with host infection status, at phylum and genus level, identified using the interpolated area under the receiver operating characteristic (ROC) curve (= AUC) in a random forest (RF) classifier. The predicted mean decreasing accuracy (MDA) score generated for each taxon, using the estimated RF model, is also shown. AUCs > 0.5 are not shown. In comparative analyses between gut microbial profiles of helminth-infected and -uninfected hosts, only phyla and genera making up > 1% and > 0.5% of the overall microbiota, respectively, in at least one group are reported

From: MICHELINdb: a web-based tool for mining of helminth-microbiota interaction datasets, and a meta-analysis of current research

 Relative abundance (%)
PhylumGenusAUCFold changeUninfectedInfected
Non-rodents
ActinobacteriaCollinsella0.56− 0.642.373.69
ActinobacteriaBifidobacterium0.540.852.682.26
Bacteroidetes 0.581.1818.8316.01
 Bacteroides0.600.556.973.83
Parabacteroides0.580.710.510.37
Alloprevotella0.510.691.050.72
Firmicutes 0.56− 1.1048.9454.05
Streptococcus0.520.652.581.69
Catenibacterium0.53− 0.410.330.80
Holdemanella0.57− 0.510.761.48
Lachnoclostridium0.520.980.580.57
Subdoligranulum0.550.832.391.99
Veillonella0.54− 0.460.290.62
Peptoclostridium0.55− 0.480.841.76
Blautia0.54− 0.811.772.19
Megamonas0.54− 0.450.350.78
Romboutsia0.52− 0.720.650.89
Faecalibacterium0.550.882.642.32
Dialister0.540.780.970.76
Turicibacter0.52− 0.290.160.56
Fusobacteria 0.55− 1.211.702.06
Fusobacterium0.57− 0.911.601.77
Rodents
Actinobacteria 0.541.331.270.95
Bifidobacterium0.621.660.630.38
Bacteroidetes 0.681.5146.0230.4
Alistipes0.57− 1.081.661.79
Bacteroides0.61− 1.061.061.13
Odoribacter0.57− 1.50.530.8
Firmicutes 0.65− 1.2548.3360.46
Turicibacter0.585.441.830.34
Lactobacillus0.69− 2.215.3733.82
Faecalibaculum0.621.983.011.52
Dubosiella0.612.971.240.42
Candidatus Arthromitus0.62− 59.750.010.74
Roseburia0.591.050.630.6
ProteobacteriaDesulfovibrio0.621.940.640.33
Helicobacter0.57− 7.690.10.74
Verrucomicrobia 0.58− 3.090.72.16
Akkermansia0.59− 3.140.682.14