Table 1 Statistics for high and medium quality draft genomes
SAG ID | Lineagea | # contigs | Total length (Mb) | Largest contig (bp) | N50 (bp) | GC (%) | # CDS | Completeness (%)b | Contamination (%)b | SAG qualityc |
|---|---|---|---|---|---|---|---|---|---|---|
IMSAGC_001 | Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides acidifaciens | 369 | 4.93 | 125378 | 29923 | 43.1 | 4165 | 97.27 | 1.12 | High |
IMSAGC_002 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;28-4 | 709 | 5.08 | 70754 | 13000 | 44.6 | 4725 | 93.87 | 1.78 | Medium |
IMSAGC_003 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-65 | 308 | 4.62 | 140873 | 48295 | 50.7 | 4203 | 98.85 | 3.97 | Medium |
IMSAGC_004 | Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides_B | 305 | 4.22 | 106819 | 34968 | 43.1 | 3598 | 98.62 | 0.8 | Medium |
IMSAGC_005 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-95 | 317 | 4.23 | 113574 | 39279 | 43.6 | 4110 | 96.45 | 1.45 | Medium |
IMSAGC_006 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;UBA3263;GCA_001689615.1 | 265 | 2.42 | 113083 | 24935 | 50.4 | 2284 | 85.47 | 0.89 | Medium |
IMSAGC_007 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae | 496 | 5.06 | 122936 | 25158 | 47.1 | 4957 | 95.89 | 3.59 | Medium |
IMSAGC_008 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;CAG-873 | 380 | 2.66 | 59381 | 16733 | 52.1 | 2436 | 78.2 | 1.58 | Medium |
IMSAGC_009 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-95 | 597 | 5.02 | 113931 | 23340 | 44.4 | 4633 | 95.33 | 2.87 | Medium |
IMSAGC_010 | Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus johnsonii | 54 | 1.91 | 214598 | 104736 | 34.3 | 1789 | 99.22 | 0.78 | High |
IMSAGC_011 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;COE1 | 431 | 4.25 | 143151 | 27757 | 37.9 | 3664 | 92.66 | 2.59 | High |
IMSAGC_012 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;Eubacterium_J | 419 | 3.92 | 117373 | 25561 | 45.0 | 3748 | 92.92 | 4.75 | Medium |
IMSAGC_013 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;14-2 | 884 | 5.14 | 67964 | 11980 | 44.6 | 4945 | 85.42 | 0.95 | Medium |
IMSAGC_014 | Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;F0040 | 273 | 2.64 | 87270 | 20006 | 47.1 | 2340 | 95.18 | 1.58 | Medium |
IMSAGC_015 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;Dorea | 388 | 2.55 | 63422 | 12891 | 45.3 | 2429 | 67.29 | 2.53 | Medium |
IMSAGC_016 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;CAG-485 | 385 | 1.94 | 50916 | 8558 | 46.4 | 1735 | 56.91 | 0.5 | Medium |
IMSAGC_017 | Firmicutes;Bacilli;Erysipelotrichales;Erysipelatoclostridiaceae;Erysipelatoclostridium;Erysipelatoclostridium cocleatum | 299 | 2.69 | 71470 | 19801 | 28.9 | 2384 | 95.28 | 0.94 | Medium |
IMSAGC_019 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;Dorea | 311 | 2.42 | 198629 | 20896 | 44.1 | 2370 | 62.98 | 0 | Medium |
IMSAGC_020 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-95 | 756 | 4.13 | 136678 | 11653 | 45.8 | 4150 | 57.89 | 2.63 | Medium |
IMSAGC_021 | Bacteria;Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;Dorea | 642 | 3.03 | 69412 | 9299 | 45.8 | 2954 | 60.15 | 2.58 | Medium |
IMSAGC_027 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;CAG-1031;GCA_001689585.1 | 314 | 2.00 | 63820 | 15566 | 50.5 | 1738 | 59.25 | 0 | Medium |
IMSAGC_028 | Bacteroidota;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes | 265 | 1.73 | 77838 | 22105 | 52.5 | 1581 | 56.76 | 1.92 | Medium |
IMSAG_013 | Firmicutes_A;Clostridia;Oscillospirales;CAG-272 | 229 | 1.72 | 93908 | 16943 | 45.4 | 1622 | 59.65 | 0 | Medium |
IMSAG_025 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;CAG-485 | 667 | 2.51 | 52448 | 6077 | 45.3 | 2558 | 50 | 7.76 | Medium |
IMSAG_044 | Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus_H;Lactobacillus_H reuteri_A | 200 | 1.82 | 108153 | 17958 | 38.3 | 1735 | 86.54 | 0.54 | Medium |
IMSAG_049 | Firmicutes_A;Clostridia;Lachnospirales | 317 | 1.74 | 50322 | 11294 | 39.6 | 1762 | 54.88 | 1.34 | Medium |
IMSAG_117 | Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus_B;Lactobacillus_B murinus | 314 | 1.86 | 38237 | 10806 | 40.5 | 1824 | 78.75 | 1.31 | Medium |
IMSAG_185 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-65 | 317 | 2.25 | 78895 | 17758 | 49.9 | 2117 | 54.01 | 1.45 | Medium |
IMSAG_192 | Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculum;Muribaculum intestinale | 342 | 1.89 | 59599 | 11500 | 49.3 | 1711 | 57.55 | 0 | Medium |
IMSAG_249 | Firmicutes_A;Clostridia;Lachnospirales;Lachnospiraceae;CAG-95 | 428 | 2.83 | 108242 | 17278 | 44.4 | 2659 | 55.18 | 0.91 | Medium |
IMSAG_250 | Firmicutes_A;Clostridia;Oscillospirales;DTU089;Eubacterium_R | 147 | 1.35 | 87509 | 28237 | 37.8 | 1309 | 68.68 | 0 | Medium |