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Table 2 Random forest classification models of season

From: The subway microbiome: seasonal dynamics and direct comparison of air and surface bacterial communities

Season
Out-of-bag estimate of error rate: 8.94%
 Confusion matrix Autumn Spring Summer Winter Class error (%)
  Autumn 53 1 5 1 11.7
  Spring 0 54 1 1 3.6
  Summer 9 0 63 0 12.5
  Winter 2 2 0 54 6.9
Most important genera in sample classification
 Family:genera Autumn Spring Summer Winter MDA
  Moraxellaceae:Psychrobacter 0.026 0.039 0.040 0.069 0.043
  Microbacteriaceae:Cryobacterium 0.022 0.057 0.011 0.004 0.022
  Flavobacteriaceae:Flavobacterium 0.009 0.012 0.021 0.040 0.020
  Nocardioidaceae:Nocardioides 0.020 0.024 0.011 0.013 0.016
  Flavobacteriaceae:Gillisia 0.024 0.003 0.002 0.014 0.010
  Chitinophagaceae:Ferruginibacter 0.009 0.012 0.007 0.009 0.009
  Gaiellaceae:Gaiella 0.000 0.011 0.002 0.018 0.008
  Ilumatobacteraceae:CL500-29_marine_group 0.001 0.015 0.003 0.012 0.007
  Burkholderiaceae:Polaromonas 0.008 0.015 0.001 0.002 0.006
  Rubritaleaceae:Luteolibacter 0.000 0.018 0.003 0.004 0.006
  Sphingomonadaceae:Qipengyuania 0.001 0.001 0.009 0.010 0.005
  Clostridiaceae_1:Clostridium_sensu_stricto_13 0.000 0.016 0.001 0.006 0.005
  Xanthomonadaceae:Thermomonas 0.001 0.006 0.003 0.012 0.005
  Chthoniobacteraceae:Candidatus_Udaeobacter 0.001 0.009 0.002 0.009 0.005
  Staphylococcaceae:Staphylococcus 0.012 0.007 0.002 0.000 0.005
  Microbacteriaceae:Galbitalea 0.003 0.017 0.000 0.001 0.005
  Pseudoalteromonadaceae:Pseudoalteromonas 0.003 0.000 0.010 0.004 0.005
  Phormidiaceae:Tychonema_CCAP_1459:11B 0.001 0.000 0.006 0.011 0.004
  Ilumatobacteraceae:Ilumatobacter 0.001 0.006 0.002 0.009 0.004
  Demequinaceae:Demequina 0.000 0.010 0.002 0.004 0.004
  1. Confusion matrices show the classification of samples and the associated class error. The mean decrease in model accuracy (MDA; from removing the genus in question) and mean Z-scores are given for the 20 most important genera for classifying samples