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Table 4 Results of indicator species analysis for samples from different habitats

From: Niche differentiation rather than biogeography shapes the diversity and composition of microbiome of Cycas panzhihuaensis

 

Indicator species

KM

PZH

Indicator value

P value

Seed

Unfertilized seed

Ovule

Pollen

Root

Soil

Seed

Root

Soil

16S

Nocardioidaceae

0.05%

0.01%

0

0.72%

0.24%

4.71%

0.20%

0.14%

0.65%

0.945

0.002**

Pseudonocardiaceae

0.11%

0.01%

0.01%

0.60%

53.85%

2.17%

0.04%

18.88%

2.78%

0.856

0.001***

Hyphomicrobiaceae

0.57%

0.08%

0.01%

0.19%

4.32%

8.37%

0.31%

4.84%

6.33%

0.786

0.007**

Rhodospirillaceae

0.10%

0.03%

0.01%

0.01%

5.01%

5.95%

0.06%

14.18%

2.16%

0.748

0.019*

Comamonadaceae

1.90%

0.35%

0.16%

36.56%

3.92%

1.87%

2.54%

4.83%

0.44%

0.862

0.002**

Xanthomonadaceae

0.78%

0.12%

0.01%

2.32%

2.65%

0.73%

2.65%

0.44%

0.18%

0.817

0.004**

Rhizobiaceae

0.10%

0

0.01%

0.40%

0.06%

0.18%

0.64%

1.46%

0.21%

0.749

0.016*

Bradyrhizobiaceae

0.04%

0.02%

0

0.06%

3.21%

1.71%

0.37%

0.97%

1.38%

0.612

0.049*

Patulibacteraceae

0.03%

0

0

0.16%

0.82%

1.55%

0.04%

0.99%

1.40%

0.791

0.002**

Mycobacteriaceae

0

0

0

0.03%

0.61%

0.69%

0.73%

0.99%

1.92%

0.791

0.002**

Bacillaceae

0.20%

0.04%

0

0.78%

0.01%

0.11%

0.13%

1.95%

12.17%

0.785

0.002**

Sinobacteraceae

4.47%

0.25%

0.09%

0.10%

6.01%

4.95%

1.78%

3.34%

1.18%

0.778

0.001***

Phyllobacteriaceae

0.09%

0

0.01%

0

0.18%

0.38%

0.18%

0.33%

0.31%

0.759

0.019*

Micromonosporaceae

0

0

0

0.01%

2.98%

4.77%

0.15%

4.96%

1.63%

0.755

0.006**

Chitinophagaceae

0

0

0

0

0

0

0

0

0

0.752

0.021*

Microbacteriaceae

1.65%

29.71%

0

2.71%

0.02%

0.46%

2.67%

0.02%

0.09%

0.744

0.004**

Halothiobacillaceae

0

0.01%

0

0

0

0

0

0

0

0.707

0.006**

Enterobacteriaceae

24.40%

59.34%

96.66%

1.19%

0.03%

0.12%

11.92%

0.26%

1.59%

0.679

0.018*

Moraxellaceae

0

0.01%

0.19%

0

0

0

0

0

0

0.672

0.009**

ITS

Diaporthaceae

0

0

2.59%

0.11%

1.25%

0.39%

0.04%

0.03%

3.29%

0.945

0.002**

Geminibasidiaceae

0

0.07%

10.48%

0.47%

0.38%

3.91%

0

0

15.98%

0.856

0.001***

Sebacinaceae

0

0.37%

0.03%

0

9.14%

3.37%

0.13%

0

3.39%

0.786

0.007**

Togniniaceae

0

0

0.01%

0

0

0.02%

0

0

0

0.748

0.019*

Incertae sedis

0

0

0

0

0

0

0

0

0

0.862

0.002**

Trichocomaceae

3.07%

2.58%

1.08%

4.02%

0.11%

0.61%

2.71%

4.66%

2.17%

0.817

0.004**

Sclerotiniaceae

0

0.07%

0

0.29%

0

0

0.26%

0.03%

0

0.749

0.016*

Cystobasidiaceae

0

0.04%

0

0

0

0

1.21%

0.02%

0

0.612

0.049*

Fomitopsidaceae

0.08%

0

0

0

0

0

0

0

0

0.791

0.002**

Coniochaetaceae

0

0

0

0.01%

0

0.01%

0

0

0

0.791

0.002**

Magnaporthaceae

0

0

0.64%

0.04%

0

0.19%

0

0

0

0.785

0.002**

Nectriaceae

25.29%

12.25%

43.61%

22.58%

61.22%

42.56%

14.34%

0.35%

32.04%

0.778

0.001***

Bionectriaceae

0.22%

0

2.41%

0.68%

0.07%

2.65%

0

0.06%

0

0.759

0.019*

Vibrisseaceae

0

0

0.12%

0

0

0.16%

0

0

0

0.755

0.006**

Hypocreaceae

0.47%

0.21%

0.72%

0.55%

0.10%

0.88%

0.12%

0

0

0.752

0.021*

Chaetosphaeriaceae

0

0.02%

0.22%

0.27%

0

0.33%

0

0

0

0.744

0.004**

Pluteaceae

0

0

0

0

0

0

0

0

0

0.707

0.006**

Clavicipitaceae

0

0

0.05%

0.04%

0

0.05%

0

0

0

0.679

0.018*

Myxotrichaceae

0

0

0

0

0

0

0.01%

0

0

0.672

0.009**

Chaetomiaceae

0

0.04%

0.18%

0.05%

0

0.14%

0.03%

0

0

0.652

0.032*

Tubeufiaceae

0

0

0.02%

0.01%

0

0.01%

0

0

0

0.631

0.024*

Ustilaginaceae

0

0

0.01%

0

0

0

0

0

0

0.612

0.028*

Apiosporaceae

0

0

0.02%

0

0.66%

0.04%

0

0

0

0.61

0.025*

Mucoraceae

0

0

0

0.01%

0

0

0

0.01%

0

0.605

0.029*

Halosphaeriaceae

0

0

0

0

0

0.01%

0

0

0

0.601

0.018*

  1. Significance levels: *p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001