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Table 4 Results of indicator species analysis for samples from different habitats

From: Niche differentiation rather than biogeography shapes the diversity and composition of microbiome of Cycas panzhihuaensis

 Indicator speciesKMPZHIndicator valueP value
SeedUnfertilized seedOvulePollenRootSoilSeedRootSoil
16SNocardioidaceae0.05%0.01%00.72%0.24%4.71%0.20%0.14%0.65%0.9450.002**
Pseudonocardiaceae0.11%0.01%0.01%0.60%53.85%2.17%0.04%18.88%2.78%0.8560.001***
Hyphomicrobiaceae0.57%0.08%0.01%0.19%4.32%8.37%0.31%4.84%6.33%0.7860.007**
Rhodospirillaceae0.10%0.03%0.01%0.01%5.01%5.95%0.06%14.18%2.16%0.7480.019*
Comamonadaceae1.90%0.35%0.16%36.56%3.92%1.87%2.54%4.83%0.44%0.8620.002**
Xanthomonadaceae0.78%0.12%0.01%2.32%2.65%0.73%2.65%0.44%0.18%0.8170.004**
Rhizobiaceae0.10%00.01%0.40%0.06%0.18%0.64%1.46%0.21%0.7490.016*
Bradyrhizobiaceae0.04%0.02%00.06%3.21%1.71%0.37%0.97%1.38%0.6120.049*
Patulibacteraceae0.03%000.16%0.82%1.55%0.04%0.99%1.40%0.7910.002**
Mycobacteriaceae0000.03%0.61%0.69%0.73%0.99%1.92%0.7910.002**
Bacillaceae0.20%0.04%00.78%0.01%0.11%0.13%1.95%12.17%0.7850.002**
Sinobacteraceae4.47%0.25%0.09%0.10%6.01%4.95%1.78%3.34%1.18%0.7780.001***
Phyllobacteriaceae0.09%00.01%00.18%0.38%0.18%0.33%0.31%0.7590.019*
Micromonosporaceae0000.01%2.98%4.77%0.15%4.96%1.63%0.7550.006**
Chitinophagaceae0000000000.7520.021*
Microbacteriaceae1.65%29.71%02.71%0.02%0.46%2.67%0.02%0.09%0.7440.004**
Halothiobacillaceae00.01%00000000.7070.006**
Enterobacteriaceae24.40%59.34%96.66%1.19%0.03%0.12%11.92%0.26%1.59%0.6790.018*
Moraxellaceae00.01%0.19%0000000.6720.009**
ITSDiaporthaceae002.59%0.11%1.25%0.39%0.04%0.03%3.29%0.9450.002**
Geminibasidiaceae00.07%10.48%0.47%0.38%3.91%0015.98%0.8560.001***
Sebacinaceae00.37%0.03%09.14%3.37%0.13%03.39%0.7860.007**
Togniniaceae000.01%000.02%0000.7480.019*
Incertae sedis0000000000.8620.002**
Trichocomaceae3.07%2.58%1.08%4.02%0.11%0.61%2.71%4.66%2.17%0.8170.004**
Sclerotiniaceae00.07%00.29%000.26%0.03%00.7490.016*
Cystobasidiaceae00.04%00001.21%0.02%00.6120.049*
Fomitopsidaceae0.08%000000000.7910.002**
Coniochaetaceae0000.01%00.01%0000.7910.002**
Magnaporthaceae000.64%0.04%00.19%0000.7850.002**
Nectriaceae25.29%12.25%43.61%22.58%61.22%42.56%14.34%0.35%32.04%0.7780.001***
Bionectriaceae0.22%02.41%0.68%0.07%2.65%00.06%00.7590.019*
Vibrisseaceae000.12%000.16%0000.7550.006**
Hypocreaceae0.47%0.21%0.72%0.55%0.10%0.88%0.12%000.7520.021*
Chaetosphaeriaceae00.02%0.22%0.27%00.33%0000.7440.004**
Pluteaceae0000000000.7070.006**
Clavicipitaceae000.05%0.04%00.05%0000.6790.018*
Myxotrichaceae0000000.01%000.6720.009**
Chaetomiaceae00.04%0.18%0.05%00.14%0.03%000.6520.032*
Tubeufiaceae000.02%0.01%00.01%0000.6310.024*
Ustilaginaceae000.01%0000000.6120.028*
Apiosporaceae000.02%00.66%0.04%0000.610.025*
Mucoraceae0000.01%0000.01%00.6050.029*
Halosphaeriaceae000000.01%0000.6010.018*
  1. Significance levels: *p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001