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Table 1 Summary of sequencing reads from all barcodes and samples

From: Niche differentiation rather than biogeography shapes the diversity and composition of microbiome of Cycas panzhihuaensis

  KMPZH
AssignationSeedUnfertilized seedOvulePollenRootSoilSeedRootSoil
16STotal5203063796.3358669.5060436.2540875.50629326075358110.2554228
Raw read length before QC394.40395.32394.93394.60395.33395.61394.08395.31395.56
Read length after QC376.32377.33376.95376.61377.50377.61376.08377.59377.56
Processed to haplotypes3117753781.334962938547.75301462239938232.6742342.5018268.33
Map to Greengenes OTU26055.6752235.6747945.2532134.7527498.2519637.75328233662915772
Bacteria26055.6752235.3347944.7532134.752749819637.753282336628.7515772
Cyanobacteria000354.7501.6713.750.33
Chloroplast00.330.5000.25000.250
ITSTotal57993.3361671.6761446.505859461563.5074690.505934355869.2566154.33
Raw read length before QC252.88260.31245.79246.81245.07242.91247.97239.58240.22
Read length after QC236.72242.16227.75227.88225.65224.21231.27220.88220.78
Processed to haplotypes47333.3351395.6752772.7550316.7554629.2566946.25471524783462131
Map to Genebank OTU2120317878.332529923424.7517628.5037209.7515838.6726968.5039869.33
Fungi21202.6717878.332529923422.251762537209.7515827.6726968.5039869.33
Plantae0.33002.503.5001100
  1. The number represented the mean value of each sample type