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Table 3 Sample collection, metadata, and total number of reads for all validation samples

From: NanoARG: a web service for detecting and contextualizing antimicrobial resistance genes from nanopore-derived metagenomes

Samples

Biome

Sample labels

Number of reads

Reference

Type of sample

Hong Kong activated sludge

Wastewater

HK_AS

3,307,368

This study

Complex microbial community

Hong Kong influent

Wastewater

HK_INF

2,724,813

This study

Complex microbial community

Switzerland influent

Wastewater

CHE_INF

687,835

This study

Complex microbial community

India activated sludge

Wastewater

IND_INF

1,925,639

This study

Complex microbial community

Artic glacier extreme metagenome

Glacier

GEM

344,966

Edwards, 2016

Complex microbial community

Heavily infected urine

Human associated

HIU

36,510

Schmidt, 2017

Enriched microbial community

Hospital fecal sample

Human associated

HFS

67,658

van der Helm, 2017

Enriched microbial community

Lettuce spiked Salmonella

Plant surface

LSS

211,806

Hyeon, 2018

Enriched microbial community