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Fig. 4 | Microbiome

Fig. 4

From: Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments

Fig. 4

a Comparison between Komplexity and similar software (BBMask, DUST, and RepeatMasker). The small bar plot in the lower left shows the total nucleotides masked by each tool. The central bar plot shows the number of unique nucleotides masked by every tool combination; each combination is shown by the connected dots below. Bars displaying nucleotides masked by tool combinations that include Komplexity are colored red. b Example complexity score distributions calculated by Komplexity for reads from ten stool virome samples (high microbial biomass; [15]) and ten bronchoalveolar lavage (BAL) virome samples (low-biomass, high-host; [12]) using the default parameters

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