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Fig. 2 | Microbiome

Fig. 2

From: MetaCHIP: community-level horizontal gene transfer identification through the combination of best-match and phylogenetic approaches

Fig. 2

Example output for the flanking regions of an identified HGTs. Genes encoded on the forward strand are displayed in light blue, and genes coded on the reverse strand are displayed in light green. The names of genes predicted to be HGT are highlighted in blue, large font with pairwise identity given in parentheses. Contig names are provided at the left bottom of the sequence tracks, and numbers following the contig name refer to the distances between the gene subject to HGT and either the left or right end of the contig. Red bars show similarities of the matched regions between the contigs based on BLASTN results

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Microbiome

ISSN: 2049-2618

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