Fig. 3
From: Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya
Representative polysaccharide utilization loci (PUL) related to laminarin utilization in Polaribacter bins and reference Polaribacter genomes. a, b Expression levels of a gene in the PUL of BC1_Pol and BC5_Pol, respectively. Gene expression levels were determined by TPM value. For comparison, c shows similar PULs of Polaribacter spp. including the laminarin-induced PULs in the genomes of Polaribacter sp. Hel1_33_49 and Hel1_85 obtained from a diatom bloom [82]. TBDT, TonB-dependent transporter; SusD, SusD-family protein; CBM4; carbohydrate binding module; GH16, glycoside hydrolase 16 (laminarinase); GH2, glycoside hydrolase 2; GH3, glycoside hydrolase 3; GH17, glycoside hydrolase 17; GH30, glycoside hydrolase 30; Symp, sugar:H+ symporter