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Fig. 5 | Microbiome

Fig. 5

From: Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers’ diarrhea

Fig. 5

Phylogenetic tree of identified E. coli genomes. The tree was reconstructed using the maximum likelihood method using a conserved set of protein sequences. Multiple reference E. coli genomes were included to indicate the phylogenetic positions of the identified E. coli strains. Only near-complete (completeness ≥ 80%) genomes were included in the analysis. The tree is rooted with Salmonella as an outgroup. Nodal labels represent bootstrap support values (out of 100 replicates). Strains marked with an asterisk were those that were part of a polymicrobial sample. Group A is shaded yellow, B1 and B2 blue, D is green, E is violet and F is peach

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Microbiome

ISSN: 2049-2618

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