Skip to main content

Table 2 Summary of variant calling results. Outgroup samples were excluded to report the diversity within the dataset

From: Multi-scale characterization of symbiont diversity in the pea aphid complex through metagenomic approaches

Symbiont Number of samples Number of SNPs/kb Number of indels/kb Maximum distance between two samples (variants/kb)
Serratia symbiotica 9 1.46 0.13 1.00
Buchnera aphidicola 50 12.61 0.56 3.03
Hamiltonella defensa 16 22.16 0.91 12.61
Regiella insecticola 12 18.20 0.56 16.75
Rickettsia sp. 9 1.19 0.12 1.19
Rickettsiella viridis 8 0.03 0.00 0.03
Fukatsuia symbiotica 8 2.21 0.04 1.60
Spiroplasma sp. 12 1.95 0.00 1.28