Table 1 A. vulgare samples used for the reference transcriptome and assembly statistics
From: Lignocellulose degradation at the holobiont level: teamwork in a keystone soil invertebrate
Samples | |||||
 Origin | Wolbachia status | Gender | N | GenBank | No. of reads |
  Celles sur Belle, France | + | F | 1 | SRS625835 | 3,881,922 |
  Vancouver, Canada | + | F | 1 | SRS625837 | 7,081,881 |
  Mentrida, Spain | – | F | 1 | SRS625838 | 8,768,792 |
  Heraklion, Greece | – | F | 1 | SRS625839 | 28,956,650 |
  Fornazo, Italia | – | F | 1 | SRS625840 | 8,826,638 |
  Helsingör, Denmark | + | F | 1 | SRS625841 | 7,520,054 |
  Porto Alegre, Brazil | – | F | 1 | SRS625842 | 13,957,815 |
  Germany | – | F | 1 | SRS625843 | 8,824,057 |
  Prague, Czech Republic | + | F | 1 | SRS625844 | 35,468,027 |
  Saint Guilhem, France | + | F | 1 | SRS625845 | 10,874,926 |
  Total |  |  |  |  | 134,160,762 |
Statistics | |||||
 Parameters | Number of sequences | ||||
  Total number of bases | 104,530,589 | ||||
  Total number of transcripts | 143,383 | ||||
  Total number of transcripts after removing Prokaryotes and viruses | 142,909 | ||||
  Mean GC count | 36% | ||||
  N50 | 1805 | ||||
  Mean length | 685 | ||||
  % reads used for assembly | 95.85% | ||||
  Total number of predicted ORFs | 43,672 | ||||