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Table 7 Microbial species associated with different skin status

From: Alteration of the cutaneous microbiome in psoriasis and potential role in Th17 polarization

Feature

Log(highestClassAvg)

Class

LDA effect size

p value

f__Propionibacteriaceae_g__Propionibacterium_s__acnes

5.57

Healthy

4.87

1.92E−04

f__Propionibacteriaceae_g__Propionibacterium_s__granulosum

3.96

Healthy

3.41

1.36E−02

f__Coriobacteriaceae_g__Atopobium_other

3.32

Healthy

2.93

6.00E−03

f__Ruminococcaceae_g__Ethanoligenens_s__

0.61

Healthy

2.66

2.47E−02

f__Gracilibacteraceae_g___s__

0.67

Healthy

2.48

1.76E−02

f__Coriobacteriaceae_g__Collinsella_s__aerofaciens

2.89

Healthy

2.44

1.09E−02

f__Sphingomonadaceae_g__Novosphingobium_s__

2.99

Healthy

2.43

1.07E−02

f__Rhodobacteraceae_g__Paracoccus_s__aminovorans

2.80

Healthy

2.39

1.00E−02

f__Prevotellaceae_g__Prevotella_s__stercorea

2.60

Healthy

2.33

1.71E−03

f__Desulfovibrionaceae_g__Desulfovibrio_s__

1.16

Healthy

2.24

2.47E−02

f__Rickettsiaceae_g__Rickettsia_s__

1.40

Healthy

2.22

2.83E−03

f__Victivallaceae_g___s__

1.04

Healthy

2.20

6.97E−03

f__Rivulariaceae_other_other

1.06

Healthy

2.19

2.47E−02

f__Erysipelotrichaceae_g__cc_115_s__

0.94

Healthy

2.16

1.71E−02

f__Neisseriaceae_g__Neisseria_s__subflava

2.68

Healthy

2.16

1.83E−02

f__Erysipelotrichaceae_g___Eubacterium__s__cylindroides

2.34

Healthy

2.15

1.71E−02

f__Succinivibrionaceae_g__Succinivibrio_s__

1.88

Healthy

2.06

5.69E−04

f__Lachnospiraceae_g__Coprococcus_other

1.55

Healthy

2.01

6.91E−08

f__Staphylococcaceae_g__Staphylococcus_s__aureus

4.16

PSO_L

3.72

7.47E−03

f__Pseudomonadaceae_g__Pseudomonas_s_fragi

3.93

PSO_L

3.64

3.35E−04

f__Methylobacteriaceae_g___s__

3.81

PSO_L

3.38

1.68E−03

f__oxalobacteraceae_g___s__

3.69

PSO_L

3.27

4.40E−03

f__flavobacteriaceae_other_other

1.03

PSO_L

2.94

4.15E−03

f__Sphingomonadaceae_g__Sphingomonas_s__

3.41

PSO_L

2.94

2.08E−02

o__Thiohalorhabdales_f___g___s__

1.40

PSO_L

2.89

4.15E−03

f__Ellin517_g___s__

0.48

PSO_L

2.85

2.28E−02

f___Marinicellaceae__g__Marinicella_s__

1.11

PSO_L

2.85

1.65E−02

f__Propionibacteriaceae_g__Tessaracoccus_s__

0.78

PSO_L

2.79

2.76E−02

f___g___s__

1.08

PSO_L

2.77

2.28E−02

f__flavobacteriaceae_g__flavobacterium_s__

3.12

PSO_L

2.69

5.19E−05

f__Micrococcaceae_other_other

3.23

PSO_L

2.69

9.67E−03

f__Williamsiaceae_g__Williamsia_s__

3.05

PSO_L

2.68

4.36E−02

f__Microbacteriaceae_g___s__

3.27

PSO_L

2.67

2.24E−02

f__Xanthomonadaceae_g__Wohlfahrtiimonas_s__

1.16

PSO_L

2.66

1.65E−02

f__Cytophagaceae_g__Larkinella_s__

1.16

PSO_L

2.60

6.02E−03

f__Pseudomonadaceae_g__Pseudomonas_s__

3.06

PSO_L

2.57

2.33E−03

f__Rhodobacteraceae_g__Anaerospora_other

1.16

PSO_L

2.52

5.25E−03

f__Staphylococcaceae_g__Staphylococcus_s__pettenkoferi

2.99

PSO_L

2.52

1.23E−02

f__Comamonadaceae_g__Limnobacter_s__

1.55

PSO_L

2.51

4.31E−02

f__Kineosporiaceae_g__Kineosporia_s__

1.26

PSO_L

2.49

3.75E−02

f__Legionellaceae_g__Legionella_other

1.60

PSO_L

2.46

1.15E−02

f__Chitinophagaceae_g___s__

2.81

PSO_L

2.44

4.84E−04

f__Acetobacteraceae_g___s__

3.11

PSO_L

2.42

1.75E−02

f__frankiaceae_other_other

1.46

PSO_L

2.42

1.91E−03

f__Ectothiorhodospiraceae_g___s__

1.67

PSO_L

2.36

1.85E−02

f__Dermabacteraceae_g__Dermabacter_s__

3.25

PSO_L

2.34

2.79E−03

f__Coxiellaceae_g___s__

1.60

PSO_L

2.31

2.62E−02

f___Tissierellaceae__g__Gallicola_s__

2.68

PSO_L

2.30

3.94E−02

f__Aerococcaceae_g__Alloiococcus_s_otitis

2.41

PSO_L

2.30

1.04E−05

f__Hyphomicrobiaceae_g__Hyphomicrobium_s__

2.52

PSO_L

2.28

2.71E−02

f__Dethiosulfovibrionaceae_g__Jonquetella_s__anthropi

0.99

PSO_L

2.26

2.08E−02

f__Rhodospirillaceae_g___s__

2.66

PSO_L

2.26

1.26E−02

f__Comamonadaceae_g__Comamonas_s__

2.54

PSO_L

2.24

4.73E−03

f__Piscirickettsiaceae_g___s__

1.78

PSO_L

2.23

4.39E−03

f__Methylobacteriaceae_g__Methylobacterium_s__

2.86

PSO_L

2.21

1.00E−02

f___Tissierellaceae__g__Helcococcus_s__

2.61

PSO_L

2.21

1.05E−03

f__Comamonadaceae_g__Rhodoferax_s__

1.42

PSO_L

2.18

1.39E−02

f__Neisseriaceae_g__Vogesella_s__

2.50

PSO_L

2.18

2.42E−02

f__Leuconostocaceae_g__Weissella_other

1.33

PSO_L

2.17

9.64E−03

f__Alcaligenaceae_g_oligella_s__

2.34

PSO_L

2.12

3.31E−02

f__Erythrobacteraceae_g___s__

2.67

PSO_L

2.12

2.31E−03

f__Beijerinckiaceae_g___s__

2.54

PSO_L

2.12

1.62E−02

f__Comamonadaceae_g__Roseateles_s__depolymerans

0.83

PSO_L

2.12

2.08E−02

f__Bacillaceae_other_other

2.27

PSO_L

2.07

8.81E−04

o__Phycisphaerales_f___g___s__

1.59

PSO_L

2.04

3.64E−02

f__Neisseriaceae_g___s__

4.28

PSO_N

3.78

2.89E−02

f__Neisseriaceae_g__Conchiformibius_s__

3.28

PSO_N

3.08

4.83E−05

f__Moraxellaceae_g__Acinetobacter_other

3.26

PSO_N

2.95

9.18E−03

f__Micrococcaceae_g___s__

3.34

PSO_N

2.81

5.11E−03

f__Bradyrhizobiaceae_other_other

2.99

PSO_N

2.70

2.23E−02

f__Staphylococcaceae_g__Staphylococcus_s__sciuri

2.85

PSO_N

2.51

3.23E−02

f__Syntrophobacteraceae_g___s__

1.26

PSO_N

2.40

2.85E−02

f__Streptococcaceae_g__Lactococcus_s__

2.98

PSO_N

2.38

3.17E−02

f___Chthoniobacteraceae__g___s__

1.26

PSO_N

2.35

2.55E−02

f__Moraxellaceae_g__Moraxella_s__

2.55

PSO_N

2.29

1.29E−03

f__Moraxellaceae_g__Perlucidibaca_s__

2.06

PSO_N

2.25

2.62E−02

f__Actinomycetaceae_g__Trueperella_s__

1.01

PSO_N

2.22

3.63E−02

f__Pseudonocardiaceae_g___s__

1.09

PSO_N

2.08

2.21E−02