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Table 7 Microbial species associated with different skin status

From: Alteration of the cutaneous microbiome in psoriasis and potential role in Th17 polarization

Feature Log(highestClassAvg) Class LDA effect size p value
f__Propionibacteriaceae_g__Propionibacterium_s__acnes 5.57 Healthy 4.87 1.92E−04
f__Propionibacteriaceae_g__Propionibacterium_s__granulosum 3.96 Healthy 3.41 1.36E−02
f__Coriobacteriaceae_g__Atopobium_other 3.32 Healthy 2.93 6.00E−03
f__Ruminococcaceae_g__Ethanoligenens_s__ 0.61 Healthy 2.66 2.47E−02
f__Gracilibacteraceae_g___s__ 0.67 Healthy 2.48 1.76E−02
f__Coriobacteriaceae_g__Collinsella_s__aerofaciens 2.89 Healthy 2.44 1.09E−02
f__Sphingomonadaceae_g__Novosphingobium_s__ 2.99 Healthy 2.43 1.07E−02
f__Rhodobacteraceae_g__Paracoccus_s__aminovorans 2.80 Healthy 2.39 1.00E−02
f__Prevotellaceae_g__Prevotella_s__stercorea 2.60 Healthy 2.33 1.71E−03
f__Desulfovibrionaceae_g__Desulfovibrio_s__ 1.16 Healthy 2.24 2.47E−02
f__Rickettsiaceae_g__Rickettsia_s__ 1.40 Healthy 2.22 2.83E−03
f__Victivallaceae_g___s__ 1.04 Healthy 2.20 6.97E−03
f__Rivulariaceae_other_other 1.06 Healthy 2.19 2.47E−02
f__Erysipelotrichaceae_g__cc_115_s__ 0.94 Healthy 2.16 1.71E−02
f__Neisseriaceae_g__Neisseria_s__subflava 2.68 Healthy 2.16 1.83E−02
f__Erysipelotrichaceae_g___Eubacterium__s__cylindroides 2.34 Healthy 2.15 1.71E−02
f__Succinivibrionaceae_g__Succinivibrio_s__ 1.88 Healthy 2.06 5.69E−04
f__Lachnospiraceae_g__Coprococcus_other 1.55 Healthy 2.01 6.91E−08
f__Staphylococcaceae_g__Staphylococcus_s__aureus 4.16 PSO_L 3.72 7.47E−03
f__Pseudomonadaceae_g__Pseudomonas_s_fragi 3.93 PSO_L 3.64 3.35E−04
f__Methylobacteriaceae_g___s__ 3.81 PSO_L 3.38 1.68E−03
f__oxalobacteraceae_g___s__ 3.69 PSO_L 3.27 4.40E−03
f__flavobacteriaceae_other_other 1.03 PSO_L 2.94 4.15E−03
f__Sphingomonadaceae_g__Sphingomonas_s__ 3.41 PSO_L 2.94 2.08E−02
o__Thiohalorhabdales_f___g___s__ 1.40 PSO_L 2.89 4.15E−03
f__Ellin517_g___s__ 0.48 PSO_L 2.85 2.28E−02
f___Marinicellaceae__g__Marinicella_s__ 1.11 PSO_L 2.85 1.65E−02
f__Propionibacteriaceae_g__Tessaracoccus_s__ 0.78 PSO_L 2.79 2.76E−02
f___g___s__ 1.08 PSO_L 2.77 2.28E−02
f__flavobacteriaceae_g__flavobacterium_s__ 3.12 PSO_L 2.69 5.19E−05
f__Micrococcaceae_other_other 3.23 PSO_L 2.69 9.67E−03
f__Williamsiaceae_g__Williamsia_s__ 3.05 PSO_L 2.68 4.36E−02
f__Microbacteriaceae_g___s__ 3.27 PSO_L 2.67 2.24E−02
f__Xanthomonadaceae_g__Wohlfahrtiimonas_s__ 1.16 PSO_L 2.66 1.65E−02
f__Cytophagaceae_g__Larkinella_s__ 1.16 PSO_L 2.60 6.02E−03
f__Pseudomonadaceae_g__Pseudomonas_s__ 3.06 PSO_L 2.57 2.33E−03
f__Rhodobacteraceae_g__Anaerospora_other 1.16 PSO_L 2.52 5.25E−03
f__Staphylococcaceae_g__Staphylococcus_s__pettenkoferi 2.99 PSO_L 2.52 1.23E−02
f__Comamonadaceae_g__Limnobacter_s__ 1.55 PSO_L 2.51 4.31E−02
f__Kineosporiaceae_g__Kineosporia_s__ 1.26 PSO_L 2.49 3.75E−02
f__Legionellaceae_g__Legionella_other 1.60 PSO_L 2.46 1.15E−02
f__Chitinophagaceae_g___s__ 2.81 PSO_L 2.44 4.84E−04
f__Acetobacteraceae_g___s__ 3.11 PSO_L 2.42 1.75E−02
f__frankiaceae_other_other 1.46 PSO_L 2.42 1.91E−03
f__Ectothiorhodospiraceae_g___s__ 1.67 PSO_L 2.36 1.85E−02
f__Dermabacteraceae_g__Dermabacter_s__ 3.25 PSO_L 2.34 2.79E−03
f__Coxiellaceae_g___s__ 1.60 PSO_L 2.31 2.62E−02
f___Tissierellaceae__g__Gallicola_s__ 2.68 PSO_L 2.30 3.94E−02
f__Aerococcaceae_g__Alloiococcus_s_otitis 2.41 PSO_L 2.30 1.04E−05
f__Hyphomicrobiaceae_g__Hyphomicrobium_s__ 2.52 PSO_L 2.28 2.71E−02
f__Dethiosulfovibrionaceae_g__Jonquetella_s__anthropi 0.99 PSO_L 2.26 2.08E−02
f__Rhodospirillaceae_g___s__ 2.66 PSO_L 2.26 1.26E−02
f__Comamonadaceae_g__Comamonas_s__ 2.54 PSO_L 2.24 4.73E−03
f__Piscirickettsiaceae_g___s__ 1.78 PSO_L 2.23 4.39E−03
f__Methylobacteriaceae_g__Methylobacterium_s__ 2.86 PSO_L 2.21 1.00E−02
f___Tissierellaceae__g__Helcococcus_s__ 2.61 PSO_L 2.21 1.05E−03
f__Comamonadaceae_g__Rhodoferax_s__ 1.42 PSO_L 2.18 1.39E−02
f__Neisseriaceae_g__Vogesella_s__ 2.50 PSO_L 2.18 2.42E−02
f__Leuconostocaceae_g__Weissella_other 1.33 PSO_L 2.17 9.64E−03
f__Alcaligenaceae_g_oligella_s__ 2.34 PSO_L 2.12 3.31E−02
f__Erythrobacteraceae_g___s__ 2.67 PSO_L 2.12 2.31E−03
f__Beijerinckiaceae_g___s__ 2.54 PSO_L 2.12 1.62E−02
f__Comamonadaceae_g__Roseateles_s__depolymerans 0.83 PSO_L 2.12 2.08E−02
f__Bacillaceae_other_other 2.27 PSO_L 2.07 8.81E−04
o__Phycisphaerales_f___g___s__ 1.59 PSO_L 2.04 3.64E−02
f__Neisseriaceae_g___s__ 4.28 PSO_N 3.78 2.89E−02
f__Neisseriaceae_g__Conchiformibius_s__ 3.28 PSO_N 3.08 4.83E−05
f__Moraxellaceae_g__Acinetobacter_other 3.26 PSO_N 2.95 9.18E−03
f__Micrococcaceae_g___s__ 3.34 PSO_N 2.81 5.11E−03
f__Bradyrhizobiaceae_other_other 2.99 PSO_N 2.70 2.23E−02
f__Staphylococcaceae_g__Staphylococcus_s__sciuri 2.85 PSO_N 2.51 3.23E−02
f__Syntrophobacteraceae_g___s__ 1.26 PSO_N 2.40 2.85E−02
f__Streptococcaceae_g__Lactococcus_s__ 2.98 PSO_N 2.38 3.17E−02
f___Chthoniobacteraceae__g___s__ 1.26 PSO_N 2.35 2.55E−02
f__Moraxellaceae_g__Moraxella_s__ 2.55 PSO_N 2.29 1.29E−03
f__Moraxellaceae_g__Perlucidibaca_s__ 2.06 PSO_N 2.25 2.62E−02
f__Actinomycetaceae_g__Trueperella_s__ 1.01 PSO_N 2.22 3.63E−02
f__Pseudonocardiaceae_g___s__ 1.09 PSO_N 2.08 2.21E−02