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Table 3 Classification efficiency of the MixOmics model

From: Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

Training set (leave-one-out validation) FD and ID cohort

Test set CD cohort

 

Correctly classified (%)

Incorrectly classified (%)

 

Correctly classified (%)

Incorrectly classified (%)

Current smoker

93

7

Current smoker

43

57

Never smoker

100

0

Never smoker

83

17

  1. Efficiency of the mixOmics model (sparse partial least squares discriminant analysis) in differentiating patients based on smoking status (current or never) with respect to bacterial profiles. A “training set” which consisted of the FD and ID cohort was used to develop a discriminating model, which was validated using the ‘leave-one-out’ method. The model was then tested on the CD data set
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Microbiome

ISSN: 2049-2618

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