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Table 1 Genome characteristics of Hrr. lacusprofundi strains ACAM34 and R1S1

From: Genomic variation and biogeography of Antarctic haloarchaea

 

ACAM34

R1S1

Whole genome

 Genome (kb)

3693

3468

 GC content (%)

64.0

64.7

 Number of DNA scaffolds

3

47

 Number of protein-coding genes

3665

3501

Primary replicon

 Primary replicon size (kb)

2735

2698

 GC content (%)

66.7

66.8

 Number of protein-coding genes

2745

2700

 Number of rRNA gene clusters

2

2

 ANI

99.8% identity over 98% of encoded genes

Secondary replicons

 Number of replicons/contigs

2 circular replicons

46 linear contigs

 Size (kb)

957 (525 and 431)

769

 GC content (%)

55 and 57

43–62; 57 average

 Number of protein-coding genes

920

801

 ANI

97% identity over 30% of encoded genes

 Length of shared sequences (kb)

240 kb

 Length of unique sequences (kb)

717

529

 Number of unique genes

651

544