Table 1 Genome characteristics of Hrr. lacusprofundi strains ACAM34 and R1S1
From: Genomic variation and biogeography of Antarctic haloarchaea
| ACAM34 | R1S1 | |
|---|---|---|
| Whole genome | ||
| Genome (kb) | 3693 | 3468 |
| GC content (%) | 64.0 | 64.7 |
| Number of DNA scaffolds | 3 | 47 |
| Number of protein-coding genes | 3665 | 3501 |
| Primary replicon | ||
| Primary replicon size (kb) | 2735 | 2698 |
| GC content (%) | 66.7 | 66.8 |
| Number of protein-coding genes | 2745 | 2700 |
| Number of rRNA gene clusters | 2 | 2 |
| ANI | 99.8% identity over 98% of encoded genes | |
| Secondary replicons | ||
| Number of replicons/contigs | 2 circular replicons | 46 linear contigs |
| Size (kb) | 957 (525 and 431) | 769 |
| GC content (%) | 55 and 57 | 43–62; 57 average |
| Number of protein-coding genes | 920 | 801 |
| ANI | 97% identity over 30% of encoded genes | |
| Length of shared sequences (kb) | 240 kb | |
| Length of unique sequences (kb) | 717 | 529 |
| Number of unique genes | 651 | 544 |