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Table 1 Mock communities currently integrated in tax-credit

From: Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

Study IDa Target geneb Platform Species Strains Citation
mock-1 16S HiSeq 46 48 [33]
mock-2 16S MiSeq 46 48 [33]
mock-3 16S MiSeq 21 21 [33]
mock-4 16S MiSeq 21 21 [33]
mock-5 16S MiSeq 21 21 [33]
mock-7 16S HiSeq 67 67 [34]
mock-8 16S HiSeq 67 67 [14]
mock-9 ITS HiSeq 13 16 [14]
mock-10 ITS HiSeq 13 16 [14]
mock-12 16S MiSeq 26 27 [4]
mock-16 16S MiSeq 56 59 [35]
mock-18 16S MiSeq 15 15 [36]
mock-19 16S MiSeq 15 27 [36]
mock-20 16S MiSeq 20 20 [37]
mock-21 16S MiSeq 20 20 [37]
mock-22 16S MiSeq 20 20 [37]
mock-23 16S MiSeq 20 20 [37]
mock-24 ITS MiSeq 8 8 [38]
mock-26 ITS FLX Titanium 11 11 [39]
  1. aAll studies are available on mockrobiota [14] at https://github.com/caporaso-lab/mockrobiota/tree/master/data/[studyID]
  2. bAbbreviations: 16S, 16S rRNA gene; HiSeq, Illumina HiSeq; MiSeq, Illumina MiSeq