Proposed genus | Classification (Virfam) | Bacterial hosts | Prophage name | Strains with complete prophagea | Common features | Evidence of activity | ||||
---|---|---|---|---|---|---|---|---|---|---|
Genome size, kb | RT | Integrase type | Recombinase | CRISPR spacersa | Viral contig | |||||
“FPlagaffevirus” | Myoviridae type 1, cluster 6 | F. prausnitzii B. hansenii CM62/1 | Lagaffe | A2-165, B. hansenii 20583, CM62/1 | 48.3 | Yes | IS30 TPase | ERF | Yes | |
“FPmushuvirus” | Myoviridae type1, cluster 8 “Saltoviridae” | F. prausnitzii | Mushu | A2-165, C_4543, C_4574 | 36.4 | Yes | Mu TPase | Yes | ||
Ruminococcaceae bacterium D16 | MushuRBD16 | R. bacterium D16 | 36.2 | Yes | Mu TPase | |||||
“FPlughvirus” | Siphoviridae type 1, cluster 1 | F. prausnitzii | Lugh | C_4574, C_4543 | 34.1 | Tyr Int | Sak4 | C_4544 | ||
Lugh4544 | C_4544 | 35.9 | Tyr Int | ERF | ||||||
Lugh4542 | C_4542 | 36.4 | Tyr Int | ERF | ||||||
LughKLE1255 | KLE1255 | 36.6 | Tyr Int | ERF | ||||||
Lugh4540 | C_4540 | 31.1 | Tyr Int | Sak4 | ||||||
LughL2-6 | L2-6 | 31.2 | Tyr Int | |||||||
“FPtaranisvirus” | Myoviridae type 1, cluster 6 | F. prausnitzii | Taranis | C_4574, C_4543 | 56.0 | Yes | LSR | Sak4 | C_4541(2), L2/6 | |
TaranisL2-6 | L2-6 | 41.9 | LSR | Sak4 | C_4541 | |||||
“FPeponavirus” | Myoviridae type 1, cluster 6 | F. prausnitzii | Epona | C_4573, C_4575 | 49.5 | Yes | LSR | C_4541, C_4575 | ||
EponaM21-2 | M21/2 | 48.5 | Yes | LSR | ||||||
“FPtoutatisvirus” | Myoviridae type 1, cluster 6 | F. prausnitzii | Toutatis | C_4542 | 54.7 | Yes | LSR | C_4541 | ||
ToutatisL2-6 | L2-6 | 53.6 | Yes | LSR | C_4541 | |||||
ToutatisKLE1255 | KLE1255 | 54.5 | Yes | LSR | C_4541, L2/6 | Yes | ||||
ToutatisSL3/3 | SL3/3 | 50.1 | LSR | |||||||
“FPbrigitvirus” | Myoviridae type 1, cluster 7 | F. prausnitzii | Brigit | C_4644 | 61.6 | Yes | LSR | RecT | C_4541 | |
“FPoengusvirus” | Siphoviridae type 1, cluster 2 | F. prausnitzii | Oengus | C_4542 | 58.4 | Tyr Int | Yes |