Fig. 6
From: Species classifier choice is a key consideration when analysing low-complexity food microbiome data
The effect of sequencing depth on compositional and functional analysis of kefir. a The average species-level profile of kefir samples at different sequencing depths on each sequencer. b Species whose abundances were most highly impacted by sequencing depth (0.05 < p < 0.1). c Dissimilarity plot based on the relative abundances of the SUPER-FOCUS level 3 subsystems detected in the kefir samples at different sequencing depths on each sequencer