Microbiome and ecotypic adaption of Holcus lanatus (L.) to extremes of its soil pH range, investigated through transcriptome sequencing

Table 3 Summarized overview of enriched GO terms based on complete REViGO simplification results, following DAVID GO analysis, for all shoot and root pairwise comparisons

	Classification, based on REViGO output, using similarity = 0.7	Shoot				Root
		Aa v La	Al v Ll	Aa v Al	La v Ll	Aa v La	Al v Ll	Aa v Al	La v Ll
Upregulated DEGs	Membrane	x		x	x	x	x	x
	Cell wall					x	x	x
	Binding	x
	Signal transduction	x		x
	Transport	x
	Post-translational modification	x		x
	DNA replication/gene expression						x
	Response to stimulus and stress	x	x			x	x
	Phosphate starvation and acquisition
	Lignin production and biosynthesis							x
	Oxidation-reduction/anti-oxidation	x						x
	Cell division and growth
	Microtubule motor/assembly						x
	Glutathione	x
	Hormones	x					x
	Epigenetics
	Cellulose production
Downregulated DEGs	Membrane	x	x		x	x	x	x
	Cell wall	x				x	x
	Binding	x			x	x	x
	Signal transduction	x			x		x
	Transport				x	x	x
	Post-translational modification				x
	DNA replication/gene expression	x
	Response to stimulus and stress				x	x
	Phosphate starvation and acquisition					x	x
	Lignin production and biosynthesis					x	x
	Oxidation-reduction/anti-oxidation					x	x
	Cell division and growth	x
	Microtubule motor/assembly	x				x	x	x
	Glutathione				x
	Hormones
	Epigenetics	x
	Cellulose production					x	x

A acid bog soil, L limestone quarry soil, a acid bog plant ecotype, l limestone quarry plant ecotype

ISSN: 2049-2618