Sub-pipeline | ‘Known’ viruses1 | ‘Unknown’ virus2 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
n | Assigned to the correct group | Assigned to a wrong group | Assigned as ‘unknown’ | n | Assigned as ‘unknown’ | Assigned to an existing group | |||||||
Group I: dsDNA virus | CV1 | 192 | 189 | 98.44% | 0 | 0.00% | 3 | 1.56% | 1117 | 1117 | 100.00% | 0 | 0.00% |
CV2 | 194 | 188 | 96.91% | 1 | 0.52% | 5 | 2.58% | 1117 | 1117 | 100.00% | 0 | 0.00% | |
CV3 | 192 | 190 | 98.96% | 0 | 0.00% | 2 | 1.04% | 1124 | 1124 | 100.00% | 0 | 0.00% | |
Overall | – | – | 98.10% | – | 0.17% | – | 1.73% | – | – | 100.00% | – | 0.00% | |
Group II: ssDNA virus | CV1 | 369 | 369 | 100.00% | 0 | 0.00% | 0 | 0.00% | 940 | 939 | 99.89% | 1 | 0.11% |
CV2 | 371 | 369 | 99.46% | 0 | 0.00% | 2 | 0.54% | 940 | 939 | 99.89% | 1 | 0.11% | |
CV3 | 370 | 370 | 100.00% | 0 | 0.00% | 0 | 0.00% | 946 | 945 | 99.89% | 1 | 0.11% | |
Overall | – | – | 99.82% | – | 0.00% | – | 0.18% | – | – | 99.89% | – | 0.11% | |
Group III: dsRNA virus | CV1 | 69 | 68 | 98.55% | 0 | 0.00% | 1 | 1.45% | 1240 | 1233 | 99.44% | 7 | 0.56% |
CV2 | 70 | 67 | 95.71% | 0 | 0.00% | 3 | 4.29% | 1241 | 1232 | 99.27% | 9 | 0.73% | |
CV3 | 69 | 67 | 97.10% | 0 | 0.00% | 2 | 2.90% | 1247 | 1239 | 99.36% | 8 | 0.64% | |
Overall | – | – | 97.12% | – | 0.00% | – | 2.88% | – | – | 99.36% | – | 0.64% | |
Group IV: (+)ssRNA virus | CV1 | 415 | 415 | 100.00% | 0 | 0.00% | 0 | 0.00% | 894 | 891 | 99.66% | 3 | 0.34% |
CV2 | 412 | 411 | 99.76% | 1 | 0.24% | 0 | 0.00% | 899 | 897 | 99.78% | 2 | 0.22% | |
CV3 | 415 | 412 | 99.28% | 1 | 0.24% | 2 | 0.48% | 901 | 896 | 99.45% | 5 | 0.55% | |
Overall | – | – | 99.68% | – | 0.16% | – | 0.16% | – | – | 99.63% | – | 0.37% | |
Group V: (−)ssRNA virus | CV1 | 176 | 176 | 100.00% | 0 | 0.00% | 0 | 0.00% | 1133 | 1130 | 99.74% | 3 | 0.26% |
CV2 | 177 | 177 | 100.00% | 0 | 0.00% | 0 | 0.00% | 1134 | 1132 | 99.82% | 2 | 0.18% | |
CV3 | 180 | 179 | 99.44% | 0 | 0.00% | 1 | 0.56% | 1136 | 1135 | 99.91% | 1 | 0.09% | |
Overall | – | – | 99.81% | – | 0.00% | – | 0.19% | – | – | 99.82% | – | 0.18% | |
Groups VI and VII: RT virus | CV1 | 47 | 47 | 100.00% | 0 | 0.00% | 0 | 0.00% | 1262 | 1262 | 100.00% | 0 | 0.00% |
CV2 | 46 | 46 | 100.00% | 0 | 0.00% | 0 | 0.00% | 1265 | 1265 | 100.00% | 0 | 0.00% | |
CV3 | 49 | 49 | 100.00% | 0 | 0.00% | 0 | 0.00% | 1267 | 1267 | 100.00% | 0 | 0.00% | |
Overall | – | – | 100.00% | – | 0.00% | – | 0.00% | – | – | 100.00% | – | 0.00% | |
Overall | – | – | 99.09% | – | 0.06% | – | 0.86% | – | – | 99.78% | – | 0.22% |