From: The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
Community | Habitat | Source of variation | SS | MS | R 2 | Pseudo-F | P(perm) |
---|---|---|---|---|---|---|---|
Bacteria | Leaves | Niche | 78,980 | 8775.6 | 0.29 | 5.0 | 0.0001 |
Genotype | 26,849 | 26,849 | 0.10 | 15.2 | 0.0001 | ||
N × G | 37,557 | 4173 | 0.14 | 2.4 | 0.0001 | ||
Residuals | 125,080 | 1761.7 | 0.46 | ||||
Total | 272,940 | 1.00 | |||||
Fungi | Leaves | Niche | 48,697 | 6087.1 | 0.21 | 5.6 | 0.0001 |
Genotype | 72,650 | 72,650 | 0.32 | 66.9 | 0.0001 | ||
N × G | 29,836 | 3729.5 | 0.13 | 3.4 | 0.0001 | ||
Residuals | 73,840 | 1085.9 | 0.32 | ||||
Total | 229,760 | 1.00 | |||||
Bacteria | Stem | Niche | 58,966 | 7370.8 | 0.31 | 5.4 | 0.0001 |
Genotype | 19,362 | 19,362 | 0.10 | 14.3 | 0.0001 | ||
N × G | 20,049 | 2506.2 | 0.10 | 1.8 | 0.0001 | ||
Residuals | 92,356 | 1358.2 | 0.48 | ||||
Total | 191,000 | 1.00 | |||||
Fungi | Stem | Niche | 90,054 | 11,257 | 0.36 | 7.0 | 0.0001 |
Genotype | 22,613 | 22,613 | 0.09 | 14.0 | 0.0001 | ||
N × G | 21,776 | 2722 | 0.09 | 1.7 | 0.0001 | ||
Residuals | 114,460 | 1612.1 | 0.46 | ||||
Total | 249,640 | 1.00 | |||||
Bacteria | Roots | Niche | 81,253 | 13,542 | 0.39 | 6.9 | 0.0001 |
Genotype | 6752.2 | 6752.2 | 0.03 | 3.4 | 0.0001 | ||
N × G | 13,966 | 2327.6 | 0.07 | 1.2 | 0.0213 | ||
Residuals | 106,410 | 1970.6 | 0.51 | ||||
Total | 210,180 | 1.00 | |||||
Fungi | Roots | Niche | 53,637 | 8939.5 | 0.20 | 2.8 | 0.0001 |
Genotype | 9286 | 9286 | 0.04 | 2.9 | 0.0001 | ||
N × G | 23,063 | 3843.8 | 0.09 | 1.2 | 0.0183 | ||
Residuals | 177,350 | 3167 | 0.67 | ||||
Total | 263,340 | 1.00 | |||||
Bacteria | Soil | Niche | 41,055 | 13,685 | 0.51 | 18.9 | 0.0001 |
Genotype | 8807.4 | 8807.4 | 0.11 | 12.2 | 0.0001 | ||
N × G | 7020.7 | 2340.2 | 0.09 | 3.2 | 0.0001 | ||
Residuals | 23,182 | 724.5 | 0.29 | ||||
Total | 80,066 | 1.00 | |||||
Fungi | Soil | Niche | 28,882 | 9627.3 | 0.31 | 5.9 | 0.0001 |
Genotype | 8470.1 | 8470.1 | 0.09 | 5.2 | 0.0001 | ||
N × G | 8920.8 | 2973.6 | 0.10 | 1.8 | 0.0001 | ||
Residuals | 45,882 | 1638.6 | 0.50 | ||||
Total | 92,296 | 1.00 |