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Table 3 Genes identified in both MCR MAGs and not in the other genomes

From: Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

Metabolism Annotation
Formate Oxidation NAD-dependent formate dehydrogenase alpha subunit
Oxidation of hydrogen NAD-reducing hydrogenase subunit hoxf (ec 1.12.1.2)
NAD-reducing hydrogenase subunit hoxh (ec 1.12.1.2)
NAD-reducing hydrogenase subunit hoxu (ec 1.12.1.2)
NAD-reducing hydrogenase subunit hoxy (ec 1.12.1.2)
ABC transporter Phosphate abc transporter, periplasmic phosphate-binding protein psts (tc 3.a.1.7.1)
Branched-chain amino acid abc transporter, amino acid-binding protein (tc 3.a.1.4.1)
Glycerol-3-phosphate abc transporter, permease protein ugpa (tc 3.a.1.1.3)
abc transporter atp-binding protein uup
Branched-chain amino acid abc transporter, atp-binding protein
abc transporter, atp-binding protein
Oligopeptide/dipeptide abc transporter, atp-binding protein
abc transporter, atp-binding protein
Nucleoside abc transporter, atp-binding protein
Uncharacterized abc transporter, auxiliary component yrbc
Glycerol-3-phosphate abc transporter, permease protein ugpe (tc 3.a.1.1.3)
Branched-chain amino acid abc transporter, amino acid-binding protein (tc 3.a.1.4.1)
Branched-chain amino acid abc transporter, periplasmic substrate- binding protein
Phosphate abc transporter, periplasmic phosphate-binding protein psts (tc 3.a.1.7.1)
Possible abc transporter subunit
abc transporter, permease protein
Branched-chain amino acid abc transporter, amino acid-binding protein (tc 3.a.1.4.1)
Putative abc transporter protein
abc transporter atp-binding protein
abc transporter permease protein
Peptide abc transporter, permease component
Dipeptide-binding abc transporter, periplasmic substrate-binding component (tc 3.a.1.5.2)
abc transporter, permease protein, putative
Nucleoside abc transporter, permease protein 2
Nucleoside abc transporter, permease protein 1
abc transporter, periplasmic substrate-binding protein
Spermidine putrescine abc transporter permease component potc (tc_3.a.1.11.1)
abc transporter, periplasmic spermidine putrescine-binding protein potd (tc 3.a.1.11.1)
Oxidative stress response Catalase (ec 1.11.1.6)
Host infection, environmental defense, and secretion system abc-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
abc-type phosphate/phosphonate transport system periplasmic component
abc-type polar amino acid transport system, atpase component
abc-type transport system involved in multi-copper enzyme maturation, permease component
abc-type tungstate transport system, atp-binding protein
abc-type tungstate transport system, periplasmic binding protein
abc-type tungstate transport system, permease protein
Exopolysaccharide production protein pss
General secretion pathway protein a
General secretion pathway protein d
General secretion pathway protein h
General secretion pathway protein i
General secretion pathway protein j
General secretion pathway protein k
General secretion pathway protein l
General secretion pathway protein m
General secretion pathway protein n
Membrane fusion protein of rnd. family multidrug efflux pump
rnd. multidrug efflux transporter; acriflavin resistance protein
Secretion protein hlyd precursor
Type i secretion system, outer membrane component lape # agga
Type i secretion system, membrane fusion protein lapc
Type i secretion system atpase, lssb family lapb
Type i secretion outer membrane protein, tolc precursor
Type i secretion system atpase, lssb family lapb
Type i secretion system, membrane fusion protein lapc
Type i secretion system, outer membrane component lape # agga
Type ii and iii secretion system family protein
  1. MCR MAGs’s unique gene subunits are not listed herein when other subunits belonging to the same gene were detected in other genomes