Table 1 Alignment time of strain genomes using MWGA and iterative alignment
From: ReprDB and panDB: minimalist databases with maximal microbial representation
Species | Number of aligned strains | Alignment time | |
|---|---|---|---|
MWGA (h) | Iterative alignment (h) | ||
Staphylococcus epidermidis | 50 | 4.5 | 3 |
Enterobacter cloacae | 50 | 53 | 7 |
Agrobacterium tumefaciens | 25 | 19.5 | 2 |
Burkholderia mallei | 50 | 38 | 5.5 |
Gilliamella apicola | 48 | 3 | 2 |
Bacteroides fragilis | 50 | 21.5 | 4 |
Mycobacterium abscessus | 50 | 15.5 | 4 |
Clostridium botulinum | 50 | 28 | 4 |