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Table 3 Core viral populations

From: Dietary energy drives the dynamic response of bovine rumen viral communities

Viral population

Bin length (kbp)

Median coverage (%)

Taxonomy

Predicted host

Max sample reads recruited (%)

Mean sample reads recruited (%)

1052

15.8

87.3

–

–

0.82

0.15

1566

11.9

73.2

–

–

0.33

0.07

1731

11.0

90.2

–

Bacteroidetes

0.66

0.16

614

26.8

34.2

–

–

0.32

0.07

769

21.2

58.3

–

–

0.25

0.06

1507

12.4

43.7

–

–

0.22

0.03

717

22.6

74.6

–

–

1.30

0.22

123

104.4

94.2

–

Proteobacteria

6.59

1.24

477

33.9

87.7

–

Proteobacteria

0.61

0.21

726

22.2

70.1

–

–

2.49

0.32

910

17.9

72.8

–

–

0.40

0.08

1127

14.9

45.3

–

–

0.26

0.05

1128

14.9

66.1

–

–

0.21

0.04

1822

10.5

66.2

–

–

0.29

0.05

  1. Core viral populations were defined as having at least 15% coverage in 80% or more of the rumen viral metagenomes. Since none of the core populations had homology to known viruses, hosts were inferred using HostPhinder [55]