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Table 1 Characteristics of the studies

From: Identifying predictive features of Clostridium difficile infection recurrence before, during, and after primary antibiotic treatment

Study

Target region

Sequence platform

DNA extraction protocol

Patients’ age

Patients’ sex (%)

BMI (kg/m2)

Khanna et al. [22]

V4

MiSeq Illumina

PowerFecal DNA Isolation kit (Mo Bio)

Median, 52.7

Lower percentile, 36.9

Upper percentile, 65.1

M, 39.8

F, 60.2

Median, 26.7

Lower percentile, 23.1

Upper percentile, 30.6

Pakpour et al. (current)

V4

MiSeq Illumina

PowerFecal DNA Isolation kit (Mo Bio)

Median 64.0

Lower percentile, 60.0

Upper percentile, 73.0

M, 48.4

F, 51.6

Median, 25.0

Lower percentile, 20.4

Upper percentile, 31.7