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Table 4 Comparison of alpha diversity measures among stool samples using the approximative Fisher–Pitman test stratified by individual sample IDs with 9999 permutations

From: Collection of non-meconium stool on fecal occult blood cards is an effective method for fecal microbiota studies in infants

 

Observed

Shannon

Simpson

Fisher

Card vs. tube

< 0.001

<0.001

< 0.001

0.001

RT vs. − 80 °C

0.44

0.22

0.11

0.40

Tube (7 days at − 80 °C)a

0.001

0.47

0.96

0.001

Card (3–5 days)a

0.01

0.02

0.04

0.01

Card (7 days RT)a

< 0.001

0.02

0.06

< 0.001

Card (7 days at  80 °C)a

0.002

0.01

0.02

0.001

Card (3–5 days)b

0.06

< 0.001

< 0.001

0.07

Card (7 days RT)b

0.52

0.24

0.05

0.55

Card (7 days at − 80 °C)b

0.56

0.07

0.02

0.54

  1. aComparison with tube at 0–2 days
  2. bComparison with tube 7 days at − 80 °C
  3. Values italicized are signficiant with a value of p<0.05