Environmental drivers of viral community composition in Antarctic soils identified by viromics

Microbiome

Table 1 Diversity indices for Antarctic virome subsampled read datasets at the family level

Sample code	Diversity rank^a	Diversity class	Relative abundance	Richness	Shannon-Weaver	Simpson	Fisher alpha	Beta diversity^b
MGM	1	High	47,349	33	1.71	0.73	3.47	0.19
MG3	2	High	49,352	31	1.61	0.71	3.22	0.27
CN	3	High	48,498	29	1.57	0.70	2.99	0.36
MG6	4	Medium	52,488	21	1.04	0.45	2.07	0.87
TG1	5	Medium	55,589	27	0.85	0.35	2.72	0.46
BG12	6	Medium	55,612	18	0.91	0.38	1.73	1.19
MS4	7	Medium	61,053	19	0.55	0.26	1.82	1.07
PT1	8	Medium	60,350	20	0.35	0.13	1.93	0.97
SP	9	Medium	59,309	18	0.36	0.14	1.72	1.19
MS1	10	Medium	60,886	19	0.33	0.13	1.82	1.07
TG5	11	Medium	61,573	18	0.25	0.09	1.72	1.19
MTG	12	Low	61,433	11	0.32	0.13	1.00	2.58
MTG22	13	Low	60,981	13	0.24	0.08	1.20	2.03
F1	14	Low	60,484	14	0.20	0.07	1.30	1.81

^aThe diversity rank (1 most diverse to 14 least diverse) was calculated based on the ranking for the Shannon-Weaver, Simpson, and Fisher alpha indices
^bBeta diversity was calculated as β = S/α − 1 with α as the alpha diversity or richness per site and S as the total number of families in this soil collection calculated as Chao’s estimate (S = 39.37)

ISSN: 2049-2618