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Table 2 Analysis of similarity (ANOSIM)

From: Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees

Phylogenetic level

Phylum

OTU

ANOSIM output

R

P

R

P

Rhizosphere soil vs root

0.580

0.0001***

0.945

0.0001***

Rhizosphere soil vs stem

0.780

0.0001***

0.965

0.0001***

Rhizosphere soil vs leaf

0.819

0.0001***

0.992

0.0001***

Root vs stem

0.437

0.0001***

0.804

0.0001***

Root vs leaf

0.370

0.0003**

0.888

0.0001***

Stem vs leaf

0.232

0.01*

0.294

0.002**

  1. Plant compartment effects on the bacterial community structures were calculated using ANOSIM (analysis of similarities) with the Spearman rank correlation method in Primer 7 (10,000 permutations). Plant compartments (rhizosphere soil, root, stem, leaf) were a priori defined groups at two phylogenetic levels: phylum level and OTU level. Significance levels: *P ≤ 0.01; **P ≤ 0.001; ***P ≤ 0.0001. R, ANOSIM test statistic. Graphical results of ANOSIM are displayed in Additional file 3