Phylogenetic level | Phylum | OTU |
---|
ANOSIM output |
R
|
P
|
R
|
P
|
---|
Rhizosphere soil vs root | 0.580 | 0.0001*** | 0.945 | 0.0001*** |
Rhizosphere soil vs stem | 0.780 | 0.0001*** | 0.965 | 0.0001*** |
Rhizosphere soil vs leaf | 0.819 | 0.0001*** | 0.992 | 0.0001*** |
Root vs stem | 0.437 | 0.0001*** | 0.804 | 0.0001*** |
Root vs leaf | 0.370 | 0.0003** | 0.888 | 0.0001*** |
Stem vs leaf | 0.232 | 0.01* | 0.294 | 0.002** |
- Plant compartment effects on the bacterial community structures were calculated using ANOSIM (analysis of similarities) with the Spearman rank correlation method in Primer 7 (10,000 permutations). Plant compartments (rhizosphere soil, root, stem, leaf) were a priori defined groups at two phylogenetic levels: phylum level and OTU level. Significance levels: *P ≤ 0.01; **P ≤ 0.001; ***P ≤ 0.0001. R, ANOSIM test statistic. Graphical results of ANOSIM are displayed in Additional file 3