From: Optimization of DNA extraction for advancing coral microbiota investigations
Treatment × species (number of samples) | Average DNA yield (S.D.) (ng μl−1)a | PCR efficiencyd |
---|---|---|
PS × P. lobata (3) | 4.38 (2.60)b, c | 1 |
PP × P. lobata (3) | 3.73 (1.92)b, c | 0.67 |
PB × P. lobata (3) | 3.27 (2.86) b, c | 1 |
VGl × P. lobata (3) | 0.74 (0.36) c | 1 |
PG × P. lobata (3) | 0.40 (0.06) c | 0.33 |
VG × P. lobata (3) | 10.31 (5.69) b | 0.67 |
PS × P. verrucosa (3) | 7.35 (10.71) | 0.67 |
PP × P. verrucosa (3) | 7.96 (7.81) | 0 |
PB × P. verrucosa (3) | 27.21 (23.58) | 0.67 |
VGl × P. verrucosa (1) | 4.14 | 1 |
PG × P. verrucosa (3) | 6.06 (3.56) | 1 |
VG × P. verrucosa (3) | 12.17 (6.83) | 1 |
PS × A. humilis (3) | 18.11 (25.20) | 0 |
PP × A. humilis (3) | 7.75 (11.33) | 0.33 |
PB × A. humilis (3) | 38.20 (11.70) | 1 |
VGl × A. humilis (2) | 9.46 (5.43) | 1 |
PG × A . humilis (3) | 5.49 (4.56) | 1 |
VG × A. humilis (3) | 29.33 (3.31) | 1 |
PS × O. faveolata (4) | 6.51 (2.95) | 0.75 |
PP × O. faveolata (4) | 2.24 (1.46) | 0 |
PB × O. faveolata (4) | 8.05 (8.08) | 1 |
VGl × O. faveolata (4) | 8.24 (7.69) | 1 |
PG × O. faveolata (4) | 7.47 (9.79) | 1 |
VG × O. faveolata (4) | 12.19 (13.27) | 1 |
PS × M. cavernosa (3) | 2.73 (2.10) | 0.33 |
PP × M. cavernosa (3) | 1.31 (0.42) | 0 |
PB × M. cavernosa (3) | 1.62 (1.06) | 0.67 |
VGl × M. cavernosa (3) | 0.67 (0.36) | 0.67 |
PG × M. cavernosa (3) | 1.59 (1.58) | 1 |
VG × M. cavernosa (3) | 1.79 (1.73) | 0.33 |
PS × O. annularis (3) | 7.23 (7.54) | 0 |
PP × O. annularis (3) | 1.97 (1.18) | 0 |
PB × O. annularis (3) | 9.92 (7.31) | 1 |
VGl × O. annularis (3) | 1.63 (1.08) | 1 |
PG × O. annularis (3) | 1.47 (1.78) | 1 |
VG × O. annularis (3) | 11.47 (13.35) | 1 |
PS × D. strigosa (3) | 2.28 (2.25) | 0.33 |
PP × D. strigosa (3) | 1.14 (0.29) | 0 |
PB × D. strigosa (3) | 0.96 (0.62) | 0.33 |
VGl × D. strigosa (3) | 0.24 (0.16) | 0.33 |
PG × D. strigosa (3) | 0.33 (0.14) | 0.33 |
VG × D. strigosa (3) | 0.98 (0.41) | 1 |