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Table 4 Number of Propionibacterium spp., Ralstonia spp., and Staphylococcus epidermidis read pairs in all cancer types

From: Distinguishing potential bacteria-tumor associations from contamination in a secondary data analysis of public cancer genome sequence data

Cancer type Total read pairs Total bacterial read pairs Propionibacterium read pairs Ralstonia read pairs Staphylococcus epidermis read pairs
AML 7,955,502,437 29,458,420 46,372 4,502,338 9013
BRCA 6,093,925,360 988,137 14,526 78,895 1220
GBM 5,391,069,119 20,802 1976 8244 105
KIRC 5,070,366,679 356,674 31,553 5104 1428
KIRP 541,775,677 52,313 1394 669 128
LUAD 980,790,987 29,583 534 914 28
LUSC 1,166,304,426 107,515 12,403 5345 5714
OV 8,643,898,191 34,724 196 64 23
STAD 6,689,562,270 4,847,299 31,006 1983 1323