Ancient bacteria of the Ötzi’s microbiome: a genomic tale from the Copper Age

Microbiome

Table 1 Ancient genome features

Species	Strain	Genome size	ORFs number	GC content	Contigs	COGs^a	Core genes^a	Unique genes^a	ANI^b	Related strain
Clostridium sp.	CADE	2,713,669	2605	27.06	333	3,119	1,993	215	90.04	Clostridium sp. Ade.TY
Clostridium algidicarnis	CALG	2,793,371	2588	29.98	95	2,902	2,295	216	98.38	Clostridium algidicarnis B3
Clostridium perfringens	CPER	3,860,191	3739	27.72	1,018	7,720	1,737	493	98.46	Clostridium perfringens SM101
Pseudomonas fluorescens	PFLU	5,806,496	5839	59.05	1,486	33,938	1,627	785	87.4	Pseudomonas fluorescens H14
Pseudomonas syringae	PSYR	2,744,354	2771	57.44	642	–	–	–	–	–
Pseudomonas veronii	PVER	6,299,241	5805	60.49	289	8,700	4,200	615	93.89	Pseudomonas veronii R4

^aData obtained through pan-genome analyses with the public available sequenced genomes of the same species
^bAverage nucleotide identity of the whole sequenced strains

ISSN: 2049-2618