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Table 1 Ancient genome features

From: Ancient bacteria of the Ötzi’s microbiome: a genomic tale from the Copper Age

Species Strain Genome size ORFs number GC content Contigs COGsa Core genesa Unique genesa ANIb Related strain
Clostridium sp. CADE 2,713,669 2605 27.06 333 3,119 1,993 215 90.04 Clostridium sp. Ade.TY
Clostridium algidicarnis CALG 2,793,371 2588 29.98 95 2,902 2,295 216 98.38 Clostridium algidicarnis B3
Clostridium perfringens CPER 3,860,191 3739 27.72 1,018 7,720 1,737 493 98.46 Clostridium perfringens SM101
Pseudomonas fluorescens PFLU 5,806,496 5839 59.05 1,486 33,938 1,627 785 87.4 Pseudomonas fluorescens H14
Pseudomonas syringae PSYR 2,744,354 2771 57.44 642
Pseudomonas veronii PVER 6,299,241 5805 60.49 289 8,700 4,200 615 93.89 Pseudomonas veronii R4
  1. aData obtained through pan-genome analyses with the public available sequenced genomes of the same species
  2. bAverage nucleotide identity of the whole sequenced strains