From: A fast and robust protocol for metataxonomic analysis using RNAseq data
Gene expression and relative abundance | Bacteria | Bacteria | Fungi | Fungi | Virus | |||||
---|---|---|---|---|---|---|---|---|---|---|
Species level | Genus level | Species level | Genus level | First taxon level | ||||||
TPR | FDR | TPR | FDR | TPR | FDR | TPR | FDR | TPR | FDR | |
Fixeda | 0.74 ± 0.17 | 0.28 ± 0.12 | 0.80 ± 0.17 | 0.05 ± 0.05 | 0.96 ± 0.07 | 0.33 ± 0.23 | 0.93 ± 0.10 | 0.30 ± 0.21 | 0.98 ± 0.04 | 0.03 ± 0.05 |
Variable | 0.77 | 0.33 | 0.87 | 0.04 | 1.00 | 0.12 | 1.00 | 0.06 | 0.90 | 0.18 |