Table 5 Measures of assembly characteristics by the assembler program
From: A fast and robust protocol for metataxonomic analysis using RNAseq data
Assembler | Read length | Number of contigs (thousands) | N50 contig length | Median contig length |
|---|---|---|---|---|
Inchworm | 50 | 385.7 | 68 | 62 |
Oases | 50 | 6.5 | 409 | 195 |
Inchworm | 100 | 310.7 | 315 | 192 |
Oases | 100 | 119.3 | 584 | 283 |
Inchworm | 150 | 248.6 | 689 | 305 |
Oases | 150 | 173.4 | 1047 | 501 |