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Fig. 3 | Microbiome

Fig. 3

From: The gut microbiota in conventional and serrated precursors of colorectal cancer

Fig. 3

Microbial community ecology in controls and conventional adenoma cases. Correlation network of OTUs differentially abundant between a controls and all CA cases, b controls and distal CA cases, and c controls and proximal CA cases. Spearman’s correlation coefficients were estimated using counts (normalized for DESeq2 size factors) and calculated among the samples under comparison. Lines shown between OTUs indicate Spearman’s correlation ≥0.3 (green) or ≤-0.3 (red). Direction of enrichment in relation to all CA/distal CA/proximal CA cases vs. controls was determined from DESeq2 models. OTUs are colored according to family membership. Line thickness represents strength of the correlation, in steps of 0.3–0.4 (thinnest), 0.4–0.5, 0.5–0.6, 0.6–0.7, and >0.7 (thickest). CA conventional adenoma

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