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Table 1 Viral homologues within and between individuals

From: Transmission of viruses via our microbiomes

House Subject Percent homologous within subjectsa Percent homologous between subjectsa p valueb
Feces
House 1 CA05 73.55 ± 6.33 14.27 ± 5.13 <0.0001
CA06 51.91 ± 11.30 12.48 ± 7.15 0.0058
House 2 CA13 61.49 ± 14.60 8.27 ± 6.01 <0.0001
CA14 44.27 ± 20.86 2.96 ± 2.68 <0.0001
House 3 CA23 45.23 ± 19.70 3.23 ± 4.12 <0.0001
CA24 43.87 ± 26.21 3.76 ± 4.56 0.0009
House 4 CA27 35.38 ± 29.00 3.61 ± 6.56 0.0550
CA28 36.64 ± 23.35 1.47 ± 3.11 0.0007
House 5 CA11 20.35 ± 21.07 1.00 ± 2.07 0.0646
CA12 27.99 ± 28.24 1.61 ± 2.94 0.0893
House 6 CA15 8.06 ± 11.04 3.87 ± 3.81 0.2800
CA16 51.27 ± 6.92 3.30 ± 3.71 <0.0001
House 7 CA39 47.19 ± 14.19 10.20 ± 5.12 0.0100
CA40 68.41 ± 3.30 11.35 ± 11.18 <0.0001
House 8 CA47 57.75 ± 5.80 14.74 ± 6.56 <0.0001
CA48 60.67 ± 8.20 16.84 ± 7.64 <0.0001
Saliva
House 1 CA05 14.11 ± 8.17 4.86 ± 3.71 0.1100
CA06 28.25 ± 17.26 5.79 ± 5.90 0.1000
House 2 CA13 39.51 ± 14.08 3.57 ± 3.89 0.0001
CA14 19.19 ± 17.37 6.24 ± 6.27 0.1635
House 3 CA23 26.85 ± 13.38 4.86 ± 6.57 0.0459
CA24 29.54 ± 9.62 4.29 ± 5.86 0.0099
House 4 CA27 24.03 ± 9.35 11.35 ± 9.14 0.1798
CA28 38.60 ± 26.63 16.75 ± 16.43 0.1275
House 5 CA11 29.57 ± 24.08 7.50 ± 5.85 0.1552
CA12 31.71 ± 26.37 8.75 ± 7.28 0.1579
House 6 CA15 24.33 ± 22.43 8.59 ± 9.49 0.1438
CA16 14.56 ± 18.61 7.09 ± 7.79 0.2335
House 7 CA39 9.51 ± 13.11 0.34 ± 1.19 0.0505
CA40 47.95 ± 5.12 0.24 ± 0.45 <0.0001
House 8 CA47 35.80 ± 15.61 9.77 ± 8.34 0.0529
CA48 39.48 ± 9.52 14.17 ± 8.09 0.0211
  1. aBased on the mean of 10,000 iterations. Per iteration, 10,000 random contigs were sampled
  2. bEmpirical p value based on the fraction of times the estimated percent homologous reads within each subject exceeds that for different subjects. p values ≤0.05 are represented in italics